Top 10 genes with highest correlation to Rv2379c/mbtF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2380c/mbtE | (cc=0.876) | info on Rv2380c/mbtE |
| Rv2383c/mbtB | (cc=0.87) | info on Rv2383c/mbtB |
| Rv2384/mbtA | (cc=0.8557) | info on Rv2384/mbtA |
| Rv2381c/mbtD | (cc=0.7659) | info on Rv2381c/mbtD |
| Rv2386c/mbtI | (cc=0.7404) | info on Rv2386c/mbtI |
| Rv2378c/mbtG | (cc=0.7282) | info on Rv2378c/mbtG |
| Rv2382c/mbtC | (cc=0.678) | info on Rv2382c/mbtC |
| Rv2564/glnQ | (cc=0.6761) | info on Rv2564/glnQ |
| Rv2563/- | (cc=0.6532) | info on Rv2563/- |
| Rv1592c/- | (cc=0.6473) | info on Rv1592c/- |
Correlation of Rv2379c/mbtF with Rv2563/-
Normalized LFCs for Rv2379c/mbtF:
(description and provenance of datasets)
| Rv2379c/mbtF | Rv2563/- | |
| Fe_supp_jason_reseq | 0.827 | 1.514 |
| low_pH_jason_reseq | 0.415 | 0.0 |
| NO_jason_reseq | -1.089 | -4.161 |
| B6_jason_reseq | -0.752 | -2.7 |
| MHCII_jason_reseq | -0.663 | -2.378 |
| Isoniazid02 | 0.16 | 0.677 |
| Rifampicin4 | -0.103 | -1.868 |
| Ethambutol3 | -0.095 | 2.152 |
| Meropenem3 | 1.031 | -1.269 |
| Vancomycin16 | 0.196 | -0.488 |
| Rv2680_day32 | -1.381 | -1.894 |
| H37Rv_KO_MarP | 1.346 | 0.364 |
| hypoxia_3wks | -2.157 | -2.939 |
| hypoxia_6wks | -1.416 | -3.627 |
| glycerol | 0.114 | 1.156 |
| cholesterol | 0.233 | 0.46 |
| AJ | -0.138 | -4.323 |
| Bibs02 | -0.621 | -0.13 |
| Bibs02c | -0.887 | -0.149 |
| BL6 | -0.768 | -2.974 |
| BL6a | -0.839 | -1.34 |
| BXD01 | -0.552 | -3.227 |
| BXD010 | -0.787 | -3.045 |
| BXD011 | -0.243 | -2.167 |
| BXD03 | -0.831 | -2.443 |
| BXD04 | -0.636 | -2.94 |
| BXD05 | -0.692 | -3.2 |
| BXD06 | -0.454 | -3.307 |
| BXD07 | -0.712 | -3.167 |
| BXD08 | -0.817 | -3.162 |
| BXD09 | -0.723 | -3.341 |
| CAST | 0.37 | -2.194 |
| CCcont | -0.089 | -0.754 |
| DS01 | 2.572 | 1.932 |
| DS02 | 1.698 | 1.281 |
| DS04 | 0.967 | 1.206 |
| DS0c | 0.349 | 1.634 |
| GP01 | -0.607 | -2.446 |
| GP02 | -0.511 | -2.061 |
| GP0c | -0.799 | -3.221 |
| NOD | 0.0 | -0.898 |
| NZO | 0.321 | -3.835 |
| PWK | -0.374 | 0.665 |
| H37Rv_KO_CtpC | -0.2 | -1.997 |
| H37Rv_KO_CtpD | -0.333 | -1.089 |
| H37Rv_KO_Rv1272 | -0.371 | -1.451 |
| H37Rv_KO_SugABC | -0.42 | -1.736 |
| H37Rv_KO_MbtN | -0.53 | -2.191 |
| Trans05 | -0.803 | -2.988 |
| macrophage_unactivated | 0.761 | 1.411 |
| IL1 | 0.0 | -1.64 |
| Rapamycin | -0.424 | -0.651 |
| Tcell | 1.456 | -1.212 |
| GMCSF | 0.0 | -1.212 |
| IFNab | -0.417 | 0.729 |
| IFNg | 0.0 | -2.028 |
| IFNg_GMCSF1 | 0.396 | -0.434 |
| Rv1432_day32 | -0.323 | -0.884 |
| Rv1565c_day32 | 0.0 | 2.504 |
| secA2_input | 0.723 | 0.127 |
| delta_Rv3594 | -0.82 | -2.496 |
| delta_Rv3717 | -0.866 | -2.054 |
| delta_Rv3811 | -0.907 | -2.427 |
| delta_Rv0954 | -0.204 | 2.344 |
| PonA1 | 1.211 | 2.92 |
| EccD1_KO | 1.131 | -0.743 |
| EspI_KO | 1.104 | 1.395 |
| PE35_KO | 1.916 | 2.013 |
| PPE68_KO | 1.75 | 1.67 |
| glycerol2 | -0.347 | -3.095 |
| lignocerate | -0.302 | -1.315 |
| oleate | -0.227 | -3.265 |
| phosphatidylcholine | 0.104 | -1.693 |
| acetate | 0.459 | -0.893 |
| glucAc | -0.256 | -0.881 |
| Rv0950ko | 0.311 | 0.841 |
| Rv1096ko | 0.458 | 1.013 |
| Rv3684ko | 1.359 | -0.079 |
| delta_otsA_trehalose | 0.481 | -1.192 |