Top 10 genes with highest correlation to Rv2379c/mbtF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2380c/mbtE | (cc=0.876) | info on Rv2380c/mbtE |
| Rv2383c/mbtB | (cc=0.87) | info on Rv2383c/mbtB |
| Rv2384/mbtA | (cc=0.8557) | info on Rv2384/mbtA |
| Rv2381c/mbtD | (cc=0.7659) | info on Rv2381c/mbtD |
| Rv2386c/mbtI | (cc=0.7404) | info on Rv2386c/mbtI |
| Rv2378c/mbtG | (cc=0.7282) | info on Rv2378c/mbtG |
| Rv2382c/mbtC | (cc=0.678) | info on Rv2382c/mbtC |
| Rv2564/glnQ | (cc=0.6761) | info on Rv2564/glnQ |
| Rv2563/- | (cc=0.6532) | info on Rv2563/- |
| Rv1592c/- | (cc=0.6473) | info on Rv1592c/- |
Correlation of Rv2379c/mbtF with Rv1592c/-
Normalized LFCs for Rv2379c/mbtF:
(description and provenance of datasets)
| Rv2379c/mbtF | Rv1592c/- | |
| Fe_supp_jason_reseq | 0.827 | -0.06 |
| low_pH_jason_reseq | 0.415 | 0.266 |
| NO_jason_reseq | -1.089 | -4.576 |
| B6_jason_reseq | -0.752 | -2.158 |
| MHCII_jason_reseq | -0.663 | -1.152 |
| Isoniazid02 | 0.16 | 0.671 |
| Rifampicin4 | -0.103 | -3.742 |
| Ethambutol3 | -0.095 | -0.772 |
| Meropenem3 | 1.031 | -1.817 |
| Vancomycin16 | 0.196 | -0.533 |
| Rv2680_day32 | -1.381 | -2.315 |
| H37Rv_KO_MarP | 1.346 | -0.786 |
| hypoxia_3wks | -2.157 | -3.142 |
| hypoxia_6wks | -1.416 | -3.644 |
| glycerol | 0.114 | 2.149 |
| cholesterol | 0.233 | 0.973 |
| AJ | -0.138 | -2.745 |
| Bibs02 | -0.621 | -1.372 |
| Bibs02c | -0.887 | -0.229 |
| BL6 | -0.768 | -2.01 |
| BL6a | -0.839 | -1.522 |
| BXD01 | -0.552 | -3.036 |
| BXD010 | -0.787 | -2.55 |
| BXD011 | -0.243 | -1.577 |
| BXD03 | -0.831 | -2.12 |
| BXD04 | -0.636 | -2.264 |
| BXD05 | -0.692 | -2.218 |
| BXD06 | -0.454 | -2.511 |
| BXD07 | -0.712 | -2.535 |
| BXD08 | -0.817 | -2.502 |
| BXD09 | -0.723 | -2.503 |
| CAST | 0.37 | -1.386 |
| CCcont | -0.089 | 0.216 |
| DS01 | 2.572 | 0.197 |
| DS02 | 1.698 | 0.635 |
| DS04 | 0.967 | 0.528 |
| DS0c | 0.349 | -0.096 |
| GP01 | -0.607 | -2.474 |
| GP02 | -0.511 | -2.168 |
| GP0c | -0.799 | -3.258 |
| NOD | 0.0 | 0.0 |
| NZO | 0.321 | -3.052 |
| PWK | -0.374 | -0.176 |
| H37Rv_KO_CtpC | -0.2 | -0.028 |
| H37Rv_KO_CtpD | -0.333 | 0.639 |
| H37Rv_KO_Rv1272 | -0.371 | -1.871 |
| H37Rv_KO_SugABC | -0.42 | -2.031 |
| H37Rv_KO_MbtN | -0.53 | -1.276 |
| Trans05 | -0.803 | -1.999 |
| macrophage_unactivated | 0.761 | 0.701 |
| IL1 | 0.0 | -0.276 |
| Rapamycin | -0.424 | -0.187 |
| Tcell | 1.456 | 1.352 |
| GMCSF | 0.0 | -1.919 |
| IFNab | -0.417 | -0.907 |
| IFNg | 0.0 | -1.446 |
| IFNg_GMCSF1 | 0.396 | -2.781 |
| Rv1432_day32 | -0.323 | -3.431 |
| Rv1565c_day32 | 0.0 | 1.579 |
| secA2_input | 0.723 | 0.153 |
| delta_Rv3594 | -0.82 | -4.87 |
| delta_Rv3717 | -0.866 | -4.18 |
| delta_Rv3811 | -0.907 | -4.735 |
| delta_Rv0954 | -0.204 | 2.469 |
| PonA1 | 1.211 | 1.943 |
| EccD1_KO | 1.131 | 0.405 |
| EspI_KO | 1.104 | 0.576 |
| PE35_KO | 1.916 | 1.843 |
| PPE68_KO | 1.75 | 1.478 |
| glycerol2 | -0.347 | -2.781 |
| lignocerate | -0.302 | -1.857 |
| oleate | -0.227 | -2.358 |
| phosphatidylcholine | 0.104 | -1.555 |
| acetate | 0.459 | -0.535 |
| glucAc | -0.256 | -0.789 |
| Rv0950ko | 0.311 | 1.493 |
| Rv1096ko | 0.458 | 0.078 |
| Rv3684ko | 1.359 | 0.462 |
| delta_otsA_trehalose | 0.481 | -0.764 |