Top 10 genes with highest correlation to Rv3827c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0764c/cyp51 | (cc=0.4964) | info on Rv0764c/cyp51 |
| Rv3328c/sigJ | (cc=0.4959) | info on Rv3328c/sigJ |
| Rv1221/sigE | (cc=0.4885) | info on Rv1221/sigE |
| Rv1036c/- | (cc=0.4717) | info on Rv1036c/- |
| Rv3038c/- | (cc=0.4559) | info on Rv3038c/- |
| Rv2741/PE_PGRS47 | (cc=0.4553) | info on Rv2741/PE_PGRS47 |
| Rv1953/vapC14 | (cc=0.4423) | info on Rv1953/vapC14 |
| Rv1916/aceAb | (cc=0.442) | info on Rv1916/aceAb |
| Rv1453/- | (cc=0.4415) | info on Rv1453/- |
| Rv3453/- | (cc=0.4361) | info on Rv3453/- |
Correlation of Rv3827c/- with Rv2741/PE_PGRS47
Normalized LFCs for Rv3827c/-:
(description and provenance of datasets)
| Rv3827c/- | Rv2741/PE_PGRS47 | |
| Fe_supp_jason_reseq | 0.074 | -1.435 |
| low_pH_jason_reseq | -0.489 | -1.683 |
| NO_jason_reseq | 0.063 | -0.719 |
| B6_jason_reseq | 0.078 | 0.291 |
| MHCII_jason_reseq | 0.155 | 1.197 |
| Isoniazid02 | -0.102 | -0.143 |
| Rifampicin4 | 0.403 | 0.225 |
| Ethambutol3 | -0.085 | 0.344 |
| Meropenem3 | 0.379 | 0.43 |
| Vancomycin16 | 0.464 | 0.098 |
| Rv2680_day32 | -0.041 | 0.415 |
| H37Rv_KO_MarP | 0.487 | -0.251 |
| hypoxia_3wks | 0.04 | -0.869 |
| hypoxia_6wks | 0.04 | -0.971 |
| glycerol | 0.18 | -0.105 |
| cholesterol | 0.194 | 0.0 |
| AJ | -0.227 | 0.087 |
| Bibs02 | -0.046 | 0.548 |
| Bibs02c | -0.352 | 0.461 |
| BL6 | -0.507 | -1.25 |
| BL6a | -0.363 | -0.532 |
| BXD01 | -0.219 | -0.626 |
| BXD010 | -0.161 | -0.078 |
| BXD011 | -0.493 | -0.691 |
| BXD03 | 0.073 | -0.752 |
| BXD04 | -0.227 | -0.645 |
| BXD05 | -0.277 | -0.438 |
| BXD06 | -0.435 | -0.961 |
| BXD07 | -0.393 | -0.702 |
| BXD08 | -0.589 | -0.871 |
| BXD09 | -0.582 | -0.666 |
| CAST | -0.491 | 0.467 |
| CCcont | -0.578 | -1.508 |
| DS01 | 1.03 | 0.257 |
| DS02 | 0.624 | 0.61 |
| DS04 | 0.184 | 0.672 |
| DS0c | 1.075 | 0.434 |
| GP01 | 0.56 | 0.75 |
| GP02 | -0.33 | 1.507 |
| GP0c | -0.348 | -0.028 |
| NOD | -0.345 | 0.226 |
| NZO | -0.051 | 0.131 |
| PWK | -0.219 | 0.182 |
| H37Rv_KO_CtpC | -0.688 | -0.481 |
| H37Rv_KO_CtpD | 0.845 | 0.783 |
| H37Rv_KO_Rv1272 | -0.138 | 0.163 |
| H37Rv_KO_SugABC | -0.298 | -0.866 |
| H37Rv_KO_MbtN | -0.99 | -0.39 |
| Trans05 | 0.265 | -0.387 |
| macrophage_unactivated | -0.243 | -1.203 |
| IL1 | -0.472 | -0.819 |
| Rapamycin | 0.129 | -0.746 |
| Tcell | -0.596 | -1.124 |
| GMCSF | -0.42 | -0.177 |
| IFNab | -0.517 | -0.834 |
| IFNg | -0.267 | -1.577 |
| IFNg_GMCSF1 | -0.39 | 0.0 |
| Rv1432_day32 | 0.416 | 0.329 |
| Rv1565c_day32 | 0.232 | -0.392 |
| secA2_input | 0.299 | 0.16 |
| delta_Rv3594 | 0.353 | 0.722 |
| delta_Rv3717 | 0.137 | 0.278 |
| delta_Rv3811 | 0.584 | 0.181 |
| delta_Rv0954 | -0.541 | 0.168 |
| PonA1 | 0.328 | 0.009 |
| EccD1_KO | 0.395 | 0.595 |
| EspI_KO | -0.031 | 0.699 |
| PE35_KO | 0.586 | 0.869 |
| PPE68_KO | 0.861 | 1.165 |
| glycerol2 | 0.076 | -0.673 |
| lignocerate | -0.426 | -0.905 |
| oleate | 0.581 | -0.189 |
| phosphatidylcholine | 0.076 | -0.8 |
| acetate | -0.7 | -0.798 |
| glucAc | -0.728 | -0.255 |
| Rv0950ko | -0.763 | 0.35 |
| Rv1096ko | -1.321 | -0.534 |
| Rv3684ko | -0.259 | 0.92 |
| delta_otsA_trehalose | 0.202 | -0.53 |