Top 10 genes with highest correlation to Rv3827c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0764c/cyp51 | (cc=0.4964) | info on Rv0764c/cyp51 |
| Rv3328c/sigJ | (cc=0.4959) | info on Rv3328c/sigJ |
| Rv1221/sigE | (cc=0.4885) | info on Rv1221/sigE |
| Rv1036c/- | (cc=0.4717) | info on Rv1036c/- |
| Rv3038c/- | (cc=0.4559) | info on Rv3038c/- |
| Rv2741/PE_PGRS47 | (cc=0.4553) | info on Rv2741/PE_PGRS47 |
| Rv1953/vapC14 | (cc=0.4423) | info on Rv1953/vapC14 |
| Rv1916/aceAb | (cc=0.442) | info on Rv1916/aceAb |
| Rv1453/- | (cc=0.4415) | info on Rv1453/- |
| Rv3453/- | (cc=0.4361) | info on Rv3453/- |
Correlation of Rv3827c/- with Rv1036c/-
Normalized LFCs for Rv3827c/-:
(description and provenance of datasets)
| Rv3827c/- | Rv1036c/- | |
| Fe_supp_jason_reseq | 0.074 | -0.189 |
| low_pH_jason_reseq | -0.489 | -1.604 |
| NO_jason_reseq | 0.063 | 0.391 |
| B6_jason_reseq | 0.078 | 0.798 |
| MHCII_jason_reseq | 0.155 | -0.315 |
| Isoniazid02 | -0.102 | 0.083 |
| Rifampicin4 | 0.403 | -0.236 |
| Ethambutol3 | -0.085 | -0.366 |
| Meropenem3 | 0.379 | -0.153 |
| Vancomycin16 | 0.464 | -0.088 |
| Rv2680_day32 | -0.041 | -0.116 |
| H37Rv_KO_MarP | 0.487 | -0.395 |
| hypoxia_3wks | 0.04 | -0.339 |
| hypoxia_6wks | 0.04 | 0.094 |
| glycerol | 0.18 | -0.105 |
| cholesterol | 0.194 | -0.046 |
| AJ | -0.227 | 0.95 |
| Bibs02 | -0.046 | 0.204 |
| Bibs02c | -0.352 | 0.27 |
| BL6 | -0.507 | -1.232 |
| BL6a | -0.363 | -0.726 |
| BXD01 | -0.219 | -1.407 |
| BXD010 | -0.161 | -1.754 |
| BXD011 | -0.493 | -0.878 |
| BXD03 | 0.073 | -0.689 |
| BXD04 | -0.227 | 0.293 |
| BXD05 | -0.277 | -1.173 |
| BXD06 | -0.435 | -1.427 |
| BXD07 | -0.393 | -0.603 |
| BXD08 | -0.589 | -1.543 |
| BXD09 | -0.582 | -0.5 |
| CAST | -0.491 | 0.105 |
| CCcont | -0.578 | -1.68 |
| DS01 | 1.03 | -0.075 |
| DS02 | 0.624 | -0.896 |
| DS04 | 0.184 | 0.297 |
| DS0c | 1.075 | 0.922 |
| GP01 | 0.56 | -0.652 |
| GP02 | -0.33 | -1.961 |
| GP0c | -0.348 | -1.508 |
| NOD | -0.345 | -1.277 |
| NZO | -0.051 | 0.691 |
| PWK | -0.219 | 0.358 |
| H37Rv_KO_CtpC | -0.688 | -1.109 |
| H37Rv_KO_CtpD | 0.845 | 0.442 |
| H37Rv_KO_Rv1272 | -0.138 | -0.207 |
| H37Rv_KO_SugABC | -0.298 | 0.954 |
| H37Rv_KO_MbtN | -0.99 | -1.918 |
| Trans05 | 0.265 | -0.198 |
| macrophage_unactivated | -0.243 | -0.802 |
| IL1 | -0.472 | -0.083 |
| Rapamycin | 0.129 | -0.175 |
| Tcell | -0.596 | -1.571 |
| GMCSF | -0.42 | -1.447 |
| IFNab | -0.517 | -1.784 |
| IFNg | -0.267 | -1.05 |
| IFNg_GMCSF1 | -0.39 | 0.5 |
| Rv1432_day32 | 0.416 | 0.703 |
| Rv1565c_day32 | 0.232 | 0.377 |
| secA2_input | 0.299 | 0.553 |
| delta_Rv3594 | 0.353 | 0.944 |
| delta_Rv3717 | 0.137 | 0.374 |
| delta_Rv3811 | 0.584 | -0.131 |
| delta_Rv0954 | -0.541 | 1.119 |
| PonA1 | 0.328 | 0.135 |
| EccD1_KO | 0.395 | 0.687 |
| EspI_KO | -0.031 | 0.841 |
| PE35_KO | 0.586 | 0.467 |
| PPE68_KO | 0.861 | 1.497 |
| glycerol2 | 0.076 | 0.492 |
| lignocerate | -0.426 | 0.262 |
| oleate | 0.581 | 0.325 |
| phosphatidylcholine | 0.076 | 0.399 |
| acetate | -0.7 | 0.751 |
| glucAc | -0.728 | -0.125 |
| Rv0950ko | -0.763 | -0.353 |
| Rv1096ko | -1.321 | -0.772 |
| Rv3684ko | -0.259 | 0.0 |
| delta_otsA_trehalose | 0.202 | 0.88 |