Top 10 genes with highest correlation to Rv3827c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0764c/cyp51 | (cc=0.4964) | info on Rv0764c/cyp51 |
| Rv3328c/sigJ | (cc=0.4959) | info on Rv3328c/sigJ |
| Rv1221/sigE | (cc=0.4885) | info on Rv1221/sigE |
| Rv1036c/- | (cc=0.4717) | info on Rv1036c/- |
| Rv3038c/- | (cc=0.4559) | info on Rv3038c/- |
| Rv2741/PE_PGRS47 | (cc=0.4553) | info on Rv2741/PE_PGRS47 |
| Rv1953/vapC14 | (cc=0.4423) | info on Rv1953/vapC14 |
| Rv1916/aceAb | (cc=0.442) | info on Rv1916/aceAb |
| Rv1453/- | (cc=0.4415) | info on Rv1453/- |
| Rv3453/- | (cc=0.4361) | info on Rv3453/- |
Correlation of Rv3827c/- with Rv1453/-
Normalized LFCs for Rv3827c/-:
(description and provenance of datasets)
| Rv3827c/- | Rv1453/- | |
| Fe_supp_jason_reseq | 0.074 | 0.72 |
| low_pH_jason_reseq | -0.489 | 0.659 |
| NO_jason_reseq | 0.063 | -0.672 |
| B6_jason_reseq | 0.078 | 2.065 |
| MHCII_jason_reseq | 0.155 | 1.373 |
| Isoniazid02 | -0.102 | 1.302 |
| Rifampicin4 | 0.403 | 0.219 |
| Ethambutol3 | -0.085 | 0.876 |
| Meropenem3 | 0.379 | 0.7 |
| Vancomycin16 | 0.464 | 0.114 |
| Rv2680_day32 | -0.041 | 0.241 |
| H37Rv_KO_MarP | 0.487 | 0.793 |
| hypoxia_3wks | 0.04 | 0.905 |
| hypoxia_6wks | 0.04 | 1.054 |
| glycerol | 0.18 | -0.025 |
| cholesterol | 0.194 | -0.156 |
| AJ | -0.227 | 0.35 |
| Bibs02 | -0.046 | 0.738 |
| Bibs02c | -0.352 | 0.526 |
| BL6 | -0.507 | -1.143 |
| BL6a | -0.363 | -0.062 |
| BXD01 | -0.219 | -0.497 |
| BXD010 | -0.161 | -0.054 |
| BXD011 | -0.493 | -0.022 |
| BXD03 | 0.073 | -0.914 |
| BXD04 | -0.227 | -0.5 |
| BXD05 | -0.277 | -0.657 |
| BXD06 | -0.435 | -0.426 |
| BXD07 | -0.393 | -0.491 |
| BXD08 | -0.589 | -0.219 |
| BXD09 | -0.582 | -0.257 |
| CAST | -0.491 | -0.048 |
| CCcont | -0.578 | -1.652 |
| DS01 | 1.03 | 0.818 |
| DS02 | 0.624 | 0.756 |
| DS04 | 0.184 | 1.053 |
| DS0c | 1.075 | 1.053 |
| GP01 | 0.56 | -0.652 |
| GP02 | -0.33 | -1.909 |
| GP0c | -0.348 | -1.531 |
| NOD | -0.345 | 0.251 |
| NZO | -0.051 | 0.152 |
| PWK | -0.219 | 0.436 |
| H37Rv_KO_CtpC | -0.688 | -1.253 |
| H37Rv_KO_CtpD | 0.845 | 0.017 |
| H37Rv_KO_Rv1272 | -0.138 | -0.603 |
| H37Rv_KO_SugABC | -0.298 | -0.68 |
| H37Rv_KO_MbtN | -0.99 | -0.386 |
| Trans05 | 0.265 | -0.9 |
| macrophage_unactivated | -0.243 | -0.78 |
| IL1 | -0.472 | -0.528 |
| Rapamycin | 0.129 | -0.344 |
| Tcell | -0.596 | -0.261 |
| GMCSF | -0.42 | -0.232 |
| IFNab | -0.517 | -0.538 |
| IFNg | -0.267 | -0.794 |
| IFNg_GMCSF1 | -0.39 | -0.119 |
| Rv1432_day32 | 0.416 | 0.072 |
| Rv1565c_day32 | 0.232 | 0.264 |
| secA2_input | 0.299 | 0.41 |
| delta_Rv3594 | 0.353 | -0.118 |
| delta_Rv3717 | 0.137 | -1.099 |
| delta_Rv3811 | 0.584 | 0.079 |
| delta_Rv0954 | -0.541 | -0.846 |
| PonA1 | 0.328 | -0.374 |
| EccD1_KO | 0.395 | 0.503 |
| EspI_KO | -0.031 | -0.151 |
| PE35_KO | 0.586 | 0.277 |
| PPE68_KO | 0.861 | 0.336 |
| glycerol2 | 0.076 | 0.338 |
| lignocerate | -0.426 | 0.073 |
| oleate | 0.581 | 0.525 |
| phosphatidylcholine | 0.076 | 0.43 |
| acetate | -0.7 | -0.136 |
| glucAc | -0.728 | -0.174 |
| Rv0950ko | -0.763 | -0.32 |
| Rv1096ko | -1.321 | -0.787 |
| Rv3684ko | -0.259 | -0.331 |
| delta_otsA_trehalose | 0.202 | 1.851 |