Top 10 genes with highest correlation to Rv3641c/fic:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3295/- | (cc=0.6863) | info on Rv3295/- |
| Rv2633c/- | (cc=0.6703) | info on Rv2633c/- |
| Rv3204/- | (cc=0.6526) | info on Rv3204/- |
| Rv2681/- | (cc=0.6413) | info on Rv2681/- |
| Rv0228/- | (cc=0.6367) | info on Rv0228/- |
| Rv1182/papA3 | (cc=0.6328) | info on Rv1182/papA3 |
| Rv3354/- | (cc=0.6254) | info on Rv3354/- |
| Rv2768c/PPE43 | (cc=0.6088) | info on Rv2768c/PPE43 |
| Rv2669/- | (cc=0.6074) | info on Rv2669/- |
| Rv2636/- | (cc=0.6052) | info on Rv2636/- |
Correlation of Rv3641c/fic with Rv3204/-
Normalized LFCs for Rv3641c/fic:
(description and provenance of datasets)
| Rv3641c/fic | Rv3204/- | |
| Fe_supp_jason_reseq | 0.134 | 1.304 |
| low_pH_jason_reseq | -0.298 | -0.845 |
| NO_jason_reseq | 0.396 | 0.704 |
| B6_jason_reseq | 0.721 | -0.074 |
| MHCII_jason_reseq | 0.954 | 1.04 |
| Isoniazid02 | 0.196 | 0.035 |
| Rifampicin4 | -0.363 | -1.519 |
| Ethambutol3 | -0.136 | -0.221 |
| Meropenem3 | 0.684 | -0.153 |
| Vancomycin16 | -0.202 | -0.557 |
| Rv2680_day32 | 0.825 | 1.987 |
| H37Rv_KO_MarP | 1.0 | 1.139 |
| hypoxia_3wks | -0.044 | -0.634 |
| hypoxia_6wks | 0.033 | 1.094 |
| glycerol | 0.186 | 0.941 |
| cholesterol | 0.07 | 1.101 |
| AJ | 0.276 | 1.613 |
| Bibs02 | -0.179 | 0.4 |
| Bibs02c | 0.159 | 0.28 |
| BL6 | -0.691 | -2.255 |
| BL6a | -1.482 | -2.137 |
| BXD01 | -0.277 | -0.925 |
| BXD010 | -0.343 | -2.661 |
| BXD011 | -1.176 | -1.324 |
| BXD03 | -0.536 | -2.059 |
| BXD04 | -0.746 | -2.134 |
| BXD05 | -1.159 | -1.624 |
| BXD06 | -1.08 | 0.245 |
| BXD07 | -1.24 | -1.494 |
| BXD08 | -0.466 | -2.2 |
| BXD09 | -1.22 | -2.14 |
| CAST | -0.27 | 0.829 |
| CCcont | -0.475 | 0.022 |
| DS01 | 0.435 | 2.072 |
| DS02 | -0.131 | 1.755 |
| DS04 | 0.807 | -0.204 |
| DS0c | 0.223 | 0.398 |
| GP01 | -1.119 | -0.988 |
| GP02 | -1.47 | -1.729 |
| GP0c | -1.128 | -2.454 |
| NOD | 0.072 | -0.752 |
| NZO | 0.023 | -0.516 |
| PWK | 0.259 | 0.239 |
| H37Rv_KO_CtpC | -0.686 | -0.821 |
| H37Rv_KO_CtpD | -0.398 | -1.177 |
| H37Rv_KO_Rv1272 | -0.506 | -2.789 |
| H37Rv_KO_SugABC | 0.062 | 0.042 |
| H37Rv_KO_MbtN | -0.915 | -0.855 |
| Trans05 | -0.448 | -0.928 |
| macrophage_unactivated | -0.357 | -2.62 |
| IL1 | -1.566 | -2.011 |
| Rapamycin | -1.04 | -2.547 |
| Tcell | -0.619 | -1.098 |
| GMCSF | 0.021 | -0.599 |
| IFNab | -1.303 | -1.636 |
| IFNg | -0.959 | -0.607 |
| IFNg_GMCSF1 | -0.974 | -1.838 |
| Rv1432_day32 | -0.523 | 0.0 |
| Rv1565c_day32 | 0.545 | 0.0 |
| secA2_input | 0.647 | -0.266 |
| delta_Rv3594 | 0.052 | -0.18 |
| delta_Rv3717 | -0.284 | 0.154 |
| delta_Rv3811 | -0.36 | -0.631 |
| delta_Rv0954 | -0.527 | 0.481 |
| PonA1 | -0.074 | -0.067 |
| EccD1_KO | -0.132 | 1.365 |
| EspI_KO | -0.131 | 1.48 |
| PE35_KO | -0.645 | 1.514 |
| PPE68_KO | -0.458 | 2.358 |
| glycerol2 | 0.867 | 1.484 |
| lignocerate | 0.83 | 0.941 |
| oleate | 1.269 | 0.992 |
| phosphatidylcholine | 0.982 | 1.601 |
| acetate | 0.359 | 2.534 |
| glucAc | 0.185 | 1.181 |
| Rv0950ko | -0.121 | -0.899 |
| Rv1096ko | -0.609 | -1.348 |
| Rv3684ko | -0.639 | -2.63 |
| delta_otsA_trehalose | -0.716 | -0.533 |