Top 10 genes with highest correlation to Rv3641c/fic:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3295/- | (cc=0.6863) | info on Rv3295/- |
| Rv2633c/- | (cc=0.6703) | info on Rv2633c/- |
| Rv3204/- | (cc=0.6526) | info on Rv3204/- |
| Rv2681/- | (cc=0.6413) | info on Rv2681/- |
| Rv0228/- | (cc=0.6367) | info on Rv0228/- |
| Rv1182/papA3 | (cc=0.6328) | info on Rv1182/papA3 |
| Rv3354/- | (cc=0.6254) | info on Rv3354/- |
| Rv2768c/PPE43 | (cc=0.6088) | info on Rv2768c/PPE43 |
| Rv2669/- | (cc=0.6074) | info on Rv2669/- |
| Rv2636/- | (cc=0.6052) | info on Rv2636/- |
Correlation of Rv3641c/fic with Rv1182/papA3
Normalized LFCs for Rv3641c/fic:
(description and provenance of datasets)
| Rv3641c/fic | Rv1182/papA3 | |
| Fe_supp_jason_reseq | 0.134 | 0.169 |
| low_pH_jason_reseq | -0.298 | 0.915 |
| NO_jason_reseq | 0.396 | 0.478 |
| B6_jason_reseq | 0.721 | 1.789 |
| MHCII_jason_reseq | 0.954 | 1.842 |
| Isoniazid02 | 0.196 | 0.332 |
| Rifampicin4 | -0.363 | 0.0 |
| Ethambutol3 | -0.136 | 1.685 |
| Meropenem3 | 0.684 | -0.025 |
| Vancomycin16 | -0.202 | 0.212 |
| Rv2680_day32 | 0.825 | -0.193 |
| H37Rv_KO_MarP | 1.0 | 0.574 |
| hypoxia_3wks | -0.044 | -0.69 |
| hypoxia_6wks | 0.033 | -0.422 |
| glycerol | 0.186 | -0.038 |
| cholesterol | 0.07 | 0.461 |
| AJ | 0.276 | 0.197 |
| Bibs02 | -0.179 | 0.356 |
| Bibs02c | 0.159 | -0.136 |
| BL6 | -0.691 | -1.421 |
| BL6a | -1.482 | -1.221 |
| BXD01 | -0.277 | -1.839 |
| BXD010 | -0.343 | -0.665 |
| BXD011 | -1.176 | -1.4 |
| BXD03 | -0.536 | -1.347 |
| BXD04 | -0.746 | -1.975 |
| BXD05 | -1.159 | -1.256 |
| BXD06 | -1.08 | -1.566 |
| BXD07 | -1.24 | -1.599 |
| BXD08 | -0.466 | -1.241 |
| BXD09 | -1.22 | -1.4 |
| CAST | -0.27 | 0.155 |
| CCcont | -0.475 | -1.219 |
| DS01 | 0.435 | 0.385 |
| DS02 | -0.131 | 0.271 |
| DS04 | 0.807 | 0.756 |
| DS0c | 0.223 | 0.245 |
| GP01 | -1.119 | -1.394 |
| GP02 | -1.47 | -1.579 |
| GP0c | -1.128 | -1.63 |
| NOD | 0.072 | 0.952 |
| NZO | 0.023 | 0.013 |
| PWK | 0.259 | 0.668 |
| H37Rv_KO_CtpC | -0.686 | -0.624 |
| H37Rv_KO_CtpD | -0.398 | -1.918 |
| H37Rv_KO_Rv1272 | -0.506 | -0.952 |
| H37Rv_KO_SugABC | 0.062 | -0.837 |
| H37Rv_KO_MbtN | -0.915 | 0.122 |
| Trans05 | -0.448 | 0.191 |
| macrophage_unactivated | -0.357 | -2.039 |
| IL1 | -1.566 | -0.718 |
| Rapamycin | -1.04 | -0.967 |
| Tcell | -0.619 | -2.105 |
| GMCSF | 0.021 | -1.41 |
| IFNab | -1.303 | -1.953 |
| IFNg | -0.959 | -2.793 |
| IFNg_GMCSF1 | -0.974 | -1.609 |
| Rv1432_day32 | -0.523 | -0.508 |
| Rv1565c_day32 | 0.545 | 0.088 |
| secA2_input | 0.647 | 0.0 |
| delta_Rv3594 | 0.052 | 0.502 |
| delta_Rv3717 | -0.284 | -0.268 |
| delta_Rv3811 | -0.36 | 0.827 |
| delta_Rv0954 | -0.527 | 0.24 |
| PonA1 | -0.074 | -0.067 |
| EccD1_KO | -0.132 | 0.207 |
| EspI_KO | -0.131 | 0.75 |
| PE35_KO | -0.645 | 1.21 |
| PPE68_KO | -0.458 | 1.011 |
| glycerol2 | 0.867 | 0.518 |
| lignocerate | 0.83 | 0.728 |
| oleate | 1.269 | 0.071 |
| phosphatidylcholine | 0.982 | 0.171 |
| acetate | 0.359 | -0.153 |
| glucAc | 0.185 | -0.356 |
| Rv0950ko | -0.121 | -1.152 |
| Rv1096ko | -0.609 | -0.959 |
| Rv3684ko | -0.639 | -1.624 |
| delta_otsA_trehalose | -0.716 | -0.651 |