Top 10 genes with highest correlation to Rv3641c/fic:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3295/- | (cc=0.6863) | info on Rv3295/- |
| Rv2633c/- | (cc=0.6703) | info on Rv2633c/- |
| Rv3204/- | (cc=0.6526) | info on Rv3204/- |
| Rv2681/- | (cc=0.6413) | info on Rv2681/- |
| Rv0228/- | (cc=0.6367) | info on Rv0228/- |
| Rv1182/papA3 | (cc=0.6328) | info on Rv1182/papA3 |
| Rv3354/- | (cc=0.6254) | info on Rv3354/- |
| Rv2768c/PPE43 | (cc=0.6088) | info on Rv2768c/PPE43 |
| Rv2669/- | (cc=0.6074) | info on Rv2669/- |
| Rv2636/- | (cc=0.6052) | info on Rv2636/- |
Correlation of Rv3641c/fic with Rv2636/-
Normalized LFCs for Rv3641c/fic:
(description and provenance of datasets)
| Rv3641c/fic | Rv2636/- | |
| Fe_supp_jason_reseq | 0.134 | -0.073 |
| low_pH_jason_reseq | -0.298 | -0.942 |
| NO_jason_reseq | 0.396 | 0.071 |
| B6_jason_reseq | 0.721 | 1.243 |
| MHCII_jason_reseq | 0.954 | 1.783 |
| Isoniazid02 | 0.196 | -0.55 |
| Rifampicin4 | -0.363 | 0.162 |
| Ethambutol3 | -0.136 | 0.417 |
| Meropenem3 | 0.684 | -1.06 |
| Vancomycin16 | -0.202 | -0.642 |
| Rv2680_day32 | 0.825 | 1.092 |
| H37Rv_KO_MarP | 1.0 | 0.013 |
| hypoxia_3wks | -0.044 | 0.056 |
| hypoxia_6wks | 0.033 | -0.186 |
| glycerol | 0.186 | 0.263 |
| cholesterol | 0.07 | 0.048 |
| AJ | 0.276 | 0.345 |
| Bibs02 | -0.179 | 0.177 |
| Bibs02c | 0.159 | 0.358 |
| BL6 | -0.691 | -0.987 |
| BL6a | -1.482 | -0.442 |
| BXD01 | -0.277 | -1.222 |
| BXD010 | -0.343 | -0.989 |
| BXD011 | -1.176 | -1.507 |
| BXD03 | -0.536 | -1.037 |
| BXD04 | -0.746 | -1.588 |
| BXD05 | -1.159 | -0.968 |
| BXD06 | -1.08 | -1.495 |
| BXD07 | -1.24 | -1.077 |
| BXD08 | -0.466 | -0.781 |
| BXD09 | -1.22 | -1.87 |
| CAST | -0.27 | 0.174 |
| CCcont | -0.475 | -1.767 |
| DS01 | 0.435 | 0.399 |
| DS02 | -0.131 | 0.578 |
| DS04 | 0.807 | -0.409 |
| DS0c | 0.223 | 0.083 |
| GP01 | -1.119 | -0.456 |
| GP02 | -1.47 | -0.744 |
| GP0c | -1.128 | -0.677 |
| NOD | 0.072 | 0.574 |
| NZO | 0.023 | 0.126 |
| PWK | 0.259 | -0.057 |
| H37Rv_KO_CtpC | -0.686 | -1.77 |
| H37Rv_KO_CtpD | -0.398 | -0.581 |
| H37Rv_KO_Rv1272 | -0.506 | -1.089 |
| H37Rv_KO_SugABC | 0.062 | -1.719 |
| H37Rv_KO_MbtN | -0.915 | -0.848 |
| Trans05 | -0.448 | -0.088 |
| macrophage_unactivated | -0.357 | -0.653 |
| IL1 | -1.566 | -0.445 |
| Rapamycin | -1.04 | -0.546 |
| Tcell | -0.619 | -0.867 |
| GMCSF | 0.021 | -0.446 |
| IFNab | -1.303 | -1.155 |
| IFNg | -0.959 | -0.136 |
| IFNg_GMCSF1 | -0.974 | -0.079 |
| Rv1432_day32 | -0.523 | -0.16 |
| Rv1565c_day32 | 0.545 | 0.062 |
| secA2_input | 0.647 | 1.133 |
| delta_Rv3594 | 0.052 | -0.601 |
| delta_Rv3717 | -0.284 | -0.271 |
| delta_Rv3811 | -0.36 | -0.458 |
| delta_Rv0954 | -0.527 | 0.151 |
| PonA1 | -0.074 | -0.324 |
| EccD1_KO | -0.132 | -0.151 |
| EspI_KO | -0.131 | 0.271 |
| PE35_KO | -0.645 | -0.079 |
| PPE68_KO | -0.458 | -0.266 |
| glycerol2 | 0.867 | 0.534 |
| lignocerate | 0.83 | 0.498 |
| oleate | 1.269 | 0.303 |
| phosphatidylcholine | 0.982 | 0.709 |
| acetate | 0.359 | 0.156 |
| glucAc | 0.185 | 0.155 |
| Rv0950ko | -0.121 | -0.027 |
| Rv1096ko | -0.609 | -0.25 |
| Rv3684ko | -0.639 | -0.662 |
| delta_otsA_trehalose | -0.716 | 0.719 |