Top 10 genes with highest correlation to Rv3641c/fic:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3295/- | (cc=0.6863) | info on Rv3295/- |
| Rv2633c/- | (cc=0.6703) | info on Rv2633c/- |
| Rv3204/- | (cc=0.6526) | info on Rv3204/- |
| Rv2681/- | (cc=0.6413) | info on Rv2681/- |
| Rv0228/- | (cc=0.6367) | info on Rv0228/- |
| Rv1182/papA3 | (cc=0.6328) | info on Rv1182/papA3 |
| Rv3354/- | (cc=0.6254) | info on Rv3354/- |
| Rv2768c/PPE43 | (cc=0.6088) | info on Rv2768c/PPE43 |
| Rv2669/- | (cc=0.6074) | info on Rv2669/- |
| Rv2636/- | (cc=0.6052) | info on Rv2636/- |
Correlation of Rv3641c/fic with Rv2681/-
Normalized LFCs for Rv3641c/fic:
(description and provenance of datasets)
| Rv3641c/fic | Rv2681/- | |
| Fe_supp_jason_reseq | 0.134 | 1.628 |
| low_pH_jason_reseq | -0.298 | 0.102 |
| NO_jason_reseq | 0.396 | -1.494 |
| B6_jason_reseq | 0.721 | -1.794 |
| MHCII_jason_reseq | 0.954 | 0.06 |
| Isoniazid02 | 0.196 | 1.116 |
| Rifampicin4 | -0.363 | 0.0 |
| Ethambutol3 | -0.136 | -0.528 |
| Meropenem3 | 0.684 | 0.074 |
| Vancomycin16 | -0.202 | -1.804 |
| Rv2680_day32 | 0.825 | -0.971 |
| H37Rv_KO_MarP | 1.0 | 1.769 |
| hypoxia_3wks | -0.044 | -0.969 |
| hypoxia_6wks | 0.033 | -1.355 |
| glycerol | 0.186 | 1.17 |
| cholesterol | 0.07 | -0.141 |
| AJ | 0.276 | -0.901 |
| Bibs02 | -0.179 | -0.624 |
| Bibs02c | 0.159 | -0.873 |
| BL6 | -0.691 | -2.702 |
| BL6a | -1.482 | -1.543 |
| BXD01 | -0.277 | -3.117 |
| BXD010 | -0.343 | -3.065 |
| BXD011 | -1.176 | -2.752 |
| BXD03 | -0.536 | -2.921 |
| BXD04 | -0.746 | -2.49 |
| BXD05 | -1.159 | -2.979 |
| BXD06 | -1.08 | -3.285 |
| BXD07 | -1.24 | -3.407 |
| BXD08 | -0.466 | -3.273 |
| BXD09 | -1.22 | -3.274 |
| CAST | -0.27 | -0.125 |
| CCcont | -0.475 | -1.248 |
| DS01 | 0.435 | 0.713 |
| DS02 | -0.131 | 1.419 |
| DS04 | 0.807 | 0.914 |
| DS0c | 0.223 | 0.369 |
| GP01 | -1.119 | -2.66 |
| GP02 | -1.47 | -2.4 |
| GP0c | -1.128 | -3.503 |
| NOD | 0.072 | -0.029 |
| NZO | 0.023 | -1.342 |
| PWK | 0.259 | 0.473 |
| H37Rv_KO_CtpC | -0.686 | -1.589 |
| H37Rv_KO_CtpD | -0.398 | -0.579 |
| H37Rv_KO_Rv1272 | -0.506 | -2.354 |
| H37Rv_KO_SugABC | 0.062 | -1.995 |
| H37Rv_KO_MbtN | -0.915 | -2.226 |
| Trans05 | -0.448 | -2.413 |
| macrophage_unactivated | -0.357 | -2.702 |
| IL1 | -1.566 | -3.197 |
| Rapamycin | -1.04 | -2.627 |
| Tcell | -0.619 | -2.789 |
| GMCSF | 0.021 | -3.063 |
| IFNab | -1.303 | -3.773 |
| IFNg | -0.959 | -3.1 |
| IFNg_GMCSF1 | -0.974 | -2.275 |
| Rv1432_day32 | -0.523 | -2.117 |
| Rv1565c_day32 | 0.545 | 0.625 |
| secA2_input | 0.647 | 0.518 |
| delta_Rv3594 | 0.052 | -2.518 |
| delta_Rv3717 | -0.284 | -3.253 |
| delta_Rv3811 | -0.36 | -2.858 |
| delta_Rv0954 | -0.527 | -0.079 |
| PonA1 | -0.074 | 0.705 |
| EccD1_KO | -0.132 | -0.066 |
| EspI_KO | -0.131 | 0.217 |
| PE35_KO | -0.645 | 0.432 |
| PPE68_KO | -0.458 | -0.39 |
| glycerol2 | 0.867 | 0.863 |
| lignocerate | 0.83 | -0.242 |
| oleate | 1.269 | -0.846 |
| phosphatidylcholine | 0.982 | 0.731 |
| acetate | 0.359 | 0.15 |
| glucAc | 0.185 | 1.115 |
| Rv0950ko | -0.121 | -0.482 |
| Rv1096ko | -0.609 | -0.57 |
| Rv3684ko | -0.639 | -0.91 |
| delta_otsA_trehalose | -0.716 | 1.041 |