Top 10 genes with highest correlation to Rv3641c/fic:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3295/- | (cc=0.6863) | info on Rv3295/- |
| Rv2633c/- | (cc=0.6703) | info on Rv2633c/- |
| Rv3204/- | (cc=0.6526) | info on Rv3204/- |
| Rv2681/- | (cc=0.6413) | info on Rv2681/- |
| Rv0228/- | (cc=0.6367) | info on Rv0228/- |
| Rv1182/papA3 | (cc=0.6328) | info on Rv1182/papA3 |
| Rv3354/- | (cc=0.6254) | info on Rv3354/- |
| Rv2768c/PPE43 | (cc=0.6088) | info on Rv2768c/PPE43 |
| Rv2669/- | (cc=0.6074) | info on Rv2669/- |
| Rv2636/- | (cc=0.6052) | info on Rv2636/- |
Correlation of Rv3641c/fic with Rv0228/-
Normalized LFCs for Rv3641c/fic:
(description and provenance of datasets)
| Rv3641c/fic | Rv0228/- | |
| Fe_supp_jason_reseq | 0.134 | 1.07 |
| low_pH_jason_reseq | -0.298 | 0.0 |
| NO_jason_reseq | 0.396 | 0.0 |
| B6_jason_reseq | 0.721 | 1.759 |
| MHCII_jason_reseq | 0.954 | 0.37 |
| Isoniazid02 | 0.196 | -0.167 |
| Rifampicin4 | -0.363 | 0.558 |
| Ethambutol3 | -0.136 | -0.14 |
| Meropenem3 | 0.684 | 0.128 |
| Vancomycin16 | -0.202 | 0.796 |
| Rv2680_day32 | 0.825 | 0.0 |
| H37Rv_KO_MarP | 1.0 | -0.684 |
| hypoxia_3wks | -0.044 | 0.678 |
| hypoxia_6wks | 0.033 | -0.626 |
| glycerol | 0.186 | 0.585 |
| cholesterol | 0.07 | 0.915 |
| AJ | 0.276 | 0.05 |
| Bibs02 | -0.179 | 0.56 |
| Bibs02c | 0.159 | -1.66 |
| BL6 | -0.691 | -2.023 |
| BL6a | -1.482 | -2.66 |
| BXD01 | -0.277 | -2.107 |
| BXD010 | -0.343 | -2.072 |
| BXD011 | -1.176 | -2.06 |
| BXD03 | -0.536 | -2.187 |
| BXD04 | -0.746 | -2.0 |
| BXD05 | -1.159 | -2.177 |
| BXD06 | -1.08 | -2.159 |
| BXD07 | -1.24 | -2.24 |
| BXD08 | -0.466 | -2.151 |
| BXD09 | -1.22 | -2.273 |
| CAST | -0.27 | -0.389 |
| CCcont | -0.475 | -2.131 |
| DS01 | 0.435 | -0.727 |
| DS02 | -0.131 | -1.942 |
| DS04 | 0.807 | 0.779 |
| DS0c | 0.223 | -1.431 |
| GP01 | -1.119 | -1.597 |
| GP02 | -1.47 | -1.346 |
| GP0c | -1.128 | -2.103 |
| NOD | 0.072 | -0.83 |
| NZO | 0.023 | -0.285 |
| PWK | 0.259 | 0.168 |
| H37Rv_KO_CtpC | -0.686 | -2.628 |
| H37Rv_KO_CtpD | -0.398 | -1.922 |
| H37Rv_KO_Rv1272 | -0.506 | -2.281 |
| H37Rv_KO_SugABC | 0.062 | -1.503 |
| H37Rv_KO_MbtN | -0.915 | -1.667 |
| Trans05 | -0.448 | -1.983 |
| macrophage_unactivated | -0.357 | -2.923 |
| IL1 | -1.566 | -2.747 |
| Rapamycin | -1.04 | -2.842 |
| Tcell | -0.619 | -3.017 |
| GMCSF | 0.021 | -2.445 |
| IFNab | -1.303 | -2.799 |
| IFNg | -0.959 | -2.475 |
| IFNg_GMCSF1 | -0.974 | -1.386 |
| Rv1432_day32 | -0.523 | 0.0 |
| Rv1565c_day32 | 0.545 | 0.0 |
| secA2_input | 0.647 | 1.565 |
| delta_Rv3594 | 0.052 | 0.402 |
| delta_Rv3717 | -0.284 | 0.0 |
| delta_Rv3811 | -0.36 | 0.205 |
| delta_Rv0954 | -0.527 | 0.0 |
| PonA1 | -0.074 | 0.0 |
| EccD1_KO | -0.132 | -0.865 |
| EspI_KO | -0.131 | -0.359 |
| PE35_KO | -0.645 | -0.368 |
| PPE68_KO | -0.458 | -0.841 |
| glycerol2 | 0.867 | 0.0 |
| lignocerate | 0.83 | 0.591 |
| oleate | 1.269 | 0.0 |
| phosphatidylcholine | 0.982 | 0.193 |
| acetate | 0.359 | 0.0 |
| glucAc | 0.185 | 0.0 |
| Rv0950ko | -0.121 | 0.793 |
| Rv1096ko | -0.609 | 1.143 |
| Rv3684ko | -0.639 | 0.452 |
| delta_otsA_trehalose | -0.716 | 0.0 |