Top 10 genes with highest correlation to Rv3641c/fic:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3295/- | (cc=0.6863) | info on Rv3295/- |
| Rv2633c/- | (cc=0.6703) | info on Rv2633c/- |
| Rv3204/- | (cc=0.6526) | info on Rv3204/- |
| Rv2681/- | (cc=0.6413) | info on Rv2681/- |
| Rv0228/- | (cc=0.6367) | info on Rv0228/- |
| Rv1182/papA3 | (cc=0.6328) | info on Rv1182/papA3 |
| Rv3354/- | (cc=0.6254) | info on Rv3354/- |
| Rv2768c/PPE43 | (cc=0.6088) | info on Rv2768c/PPE43 |
| Rv2669/- | (cc=0.6074) | info on Rv2669/- |
| Rv2636/- | (cc=0.6052) | info on Rv2636/- |
Correlation of Rv3641c/fic with Rv2633c/-
Normalized LFCs for Rv3641c/fic:
(description and provenance of datasets)
| Rv3641c/fic | Rv2633c/- | |
| Fe_supp_jason_reseq | 0.134 | -0.311 |
| low_pH_jason_reseq | -0.298 | -1.37 |
| NO_jason_reseq | 0.396 | 1.982 |
| B6_jason_reseq | 0.721 | 2.097 |
| MHCII_jason_reseq | 0.954 | 2.688 |
| Isoniazid02 | 0.196 | -1.835 |
| Rifampicin4 | -0.363 | 0.788 |
| Ethambutol3 | -0.136 | -1.015 |
| Meropenem3 | 0.684 | 1.543 |
| Vancomycin16 | -0.202 | 0.992 |
| Rv2680_day32 | 0.825 | -1.492 |
| H37Rv_KO_MarP | 1.0 | -0.251 |
| hypoxia_3wks | -0.044 | -1.635 |
| hypoxia_6wks | 0.033 | -0.935 |
| glycerol | 0.186 | -3.439 |
| cholesterol | 0.07 | -1.698 |
| AJ | 0.276 | -1.847 |
| Bibs02 | -0.179 | -2.015 |
| Bibs02c | 0.159 | -1.479 |
| BL6 | -0.691 | -4.097 |
| BL6a | -1.482 | -2.705 |
| BXD01 | -0.277 | -3.305 |
| BXD010 | -0.343 | -2.545 |
| BXD011 | -1.176 | -3.454 |
| BXD03 | -0.536 | -4.022 |
| BXD04 | -0.746 | -3.05 |
| BXD05 | -1.159 | -3.466 |
| BXD06 | -1.08 | -3.175 |
| BXD07 | -1.24 | -3.925 |
| BXD08 | -0.466 | -3.425 |
| BXD09 | -1.22 | -3.938 |
| CAST | -0.27 | -1.121 |
| CCcont | -0.475 | -3.226 |
| DS01 | 0.435 | -2.479 |
| DS02 | -0.131 | -2.478 |
| DS04 | 0.807 | -1.739 |
| DS0c | 0.223 | -3.309 |
| GP01 | -1.119 | -2.635 |
| GP02 | -1.47 | -2.268 |
| GP0c | -1.128 | -3.348 |
| NOD | 0.072 | -0.823 |
| NZO | 0.023 | -1.331 |
| PWK | 0.259 | -1.07 |
| H37Rv_KO_CtpC | -0.686 | -4.742 |
| H37Rv_KO_CtpD | -0.398 | -1.586 |
| H37Rv_KO_Rv1272 | -0.506 | -3.011 |
| H37Rv_KO_SugABC | 0.062 | -1.628 |
| H37Rv_KO_MbtN | -0.915 | -2.419 |
| Trans05 | -0.448 | -2.951 |
| macrophage_unactivated | -0.357 | -5.293 |
| IL1 | -1.566 | -4.974 |
| Rapamycin | -1.04 | -5.146 |
| Tcell | -0.619 | -4.558 |
| GMCSF | 0.021 | -4.605 |
| IFNab | -1.303 | -6.0 |
| IFNg | -0.959 | -4.145 |
| IFNg_GMCSF1 | -0.974 | -4.452 |
| Rv1432_day32 | -0.523 | -1.082 |
| Rv1565c_day32 | 0.545 | -0.234 |
| secA2_input | 0.647 | -0.355 |
| delta_Rv3594 | 0.052 | 0.136 |
| delta_Rv3717 | -0.284 | -1.179 |
| delta_Rv3811 | -0.36 | -0.013 |
| delta_Rv0954 | -0.527 | 0.286 |
| PonA1 | -0.074 | 0.524 |
| EccD1_KO | -0.132 | -0.987 |
| EspI_KO | -0.131 | -0.337 |
| PE35_KO | -0.645 | 0.435 |
| PPE68_KO | -0.458 | 0.701 |
| glycerol2 | 0.867 | 2.304 |
| lignocerate | 0.83 | 2.288 |
| oleate | 1.269 | 1.324 |
| phosphatidylcholine | 0.982 | 6.0 |
| acetate | 0.359 | 1.057 |
| glucAc | 0.185 | 0.245 |
| Rv0950ko | -0.121 | -1.291 |
| Rv1096ko | -0.609 | -1.846 |
| Rv3684ko | -0.639 | -0.55 |
| delta_otsA_trehalose | -0.716 | -0.497 |