Top 10 genes with highest correlation to Rv3641c/fic:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3295/- | (cc=0.6863) | info on Rv3295/- |
| Rv2633c/- | (cc=0.6703) | info on Rv2633c/- |
| Rv3204/- | (cc=0.6526) | info on Rv3204/- |
| Rv2681/- | (cc=0.6413) | info on Rv2681/- |
| Rv0228/- | (cc=0.6367) | info on Rv0228/- |
| Rv1182/papA3 | (cc=0.6328) | info on Rv1182/papA3 |
| Rv3354/- | (cc=0.6254) | info on Rv3354/- |
| Rv2768c/PPE43 | (cc=0.6088) | info on Rv2768c/PPE43 |
| Rv2669/- | (cc=0.6074) | info on Rv2669/- |
| Rv2636/- | (cc=0.6052) | info on Rv2636/- |
Correlation of Rv3641c/fic with Rv3295/-
Normalized LFCs for Rv3641c/fic:
(description and provenance of datasets)
| Rv3641c/fic | Rv3295/- | |
| Fe_supp_jason_reseq | 0.134 | -0.311 |
| low_pH_jason_reseq | -0.298 | -1.467 |
| NO_jason_reseq | 0.396 | 0.399 |
| B6_jason_reseq | 0.721 | 1.709 |
| MHCII_jason_reseq | 0.954 | 2.745 |
| Isoniazid02 | 0.196 | -0.08 |
| Rifampicin4 | -0.363 | -0.736 |
| Ethambutol3 | -0.136 | -0.766 |
| Meropenem3 | 0.684 | 1.594 |
| Vancomycin16 | -0.202 | -2.144 |
| Rv2680_day32 | 0.825 | -0.028 |
| H37Rv_KO_MarP | 1.0 | 0.872 |
| hypoxia_3wks | -0.044 | 0.04 |
| hypoxia_6wks | 0.033 | 0.069 |
| glycerol | 0.186 | -1.066 |
| cholesterol | 0.07 | -0.911 |
| AJ | 0.276 | -0.094 |
| Bibs02 | -0.179 | -0.197 |
| Bibs02c | 0.159 | -0.488 |
| BL6 | -0.691 | -1.617 |
| BL6a | -1.482 | -1.21 |
| BXD01 | -0.277 | -2.04 |
| BXD010 | -0.343 | -1.261 |
| BXD011 | -1.176 | -1.45 |
| BXD03 | -0.536 | -1.975 |
| BXD04 | -0.746 | -1.206 |
| BXD05 | -1.159 | -1.799 |
| BXD06 | -1.08 | -1.84 |
| BXD07 | -1.24 | -1.907 |
| BXD08 | -0.466 | -2.202 |
| BXD09 | -1.22 | -1.692 |
| CAST | -0.27 | -0.377 |
| CCcont | -0.475 | -2.55 |
| DS01 | 0.435 | -0.573 |
| DS02 | -0.131 | -0.243 |
| DS04 | 0.807 | -1.214 |
| DS0c | 0.223 | -0.159 |
| GP01 | -1.119 | -0.495 |
| GP02 | -1.47 | -1.862 |
| GP0c | -1.128 | -3.192 |
| NOD | 0.072 | 0.265 |
| NZO | 0.023 | 0.438 |
| PWK | 0.259 | -0.034 |
| H37Rv_KO_CtpC | -0.686 | -1.189 |
| H37Rv_KO_CtpD | -0.398 | -0.309 |
| H37Rv_KO_Rv1272 | -0.506 | -0.822 |
| H37Rv_KO_SugABC | 0.062 | -1.536 |
| H37Rv_KO_MbtN | -0.915 | -2.764 |
| Trans05 | -0.448 | -1.09 |
| macrophage_unactivated | -0.357 | -3.033 |
| IL1 | -1.566 | -2.637 |
| Rapamycin | -1.04 | -2.998 |
| Tcell | -0.619 | -2.77 |
| GMCSF | 0.021 | -2.389 |
| IFNab | -1.303 | -4.099 |
| IFNg | -0.959 | -1.86 |
| IFNg_GMCSF1 | -0.974 | -1.555 |
| Rv1432_day32 | -0.523 | 0.528 |
| Rv1565c_day32 | 0.545 | 1.414 |
| secA2_input | 0.647 | 0.819 |
| delta_Rv3594 | 0.052 | -0.159 |
| delta_Rv3717 | -0.284 | -0.35 |
| delta_Rv3811 | -0.36 | -0.437 |
| delta_Rv0954 | -0.527 | -0.012 |
| PonA1 | -0.074 | 0.697 |
| EccD1_KO | -0.132 | -0.536 |
| EspI_KO | -0.131 | -0.442 |
| PE35_KO | -0.645 | -0.096 |
| PPE68_KO | -0.458 | 0.067 |
| glycerol2 | 0.867 | 2.42 |
| lignocerate | 0.83 | 1.125 |
| oleate | 1.269 | -0.113 |
| phosphatidylcholine | 0.982 | 2.459 |
| acetate | 0.359 | 0.436 |
| glucAc | 0.185 | 0.323 |
| Rv0950ko | -0.121 | 1.019 |
| Rv1096ko | -0.609 | 0.338 |
| Rv3684ko | -0.639 | 0.907 |
| delta_otsA_trehalose | -0.716 | 0.261 |