Top 10 genes with highest correlation to Rv3615c/espC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3614c/espD | (cc=0.9176) | info on Rv3614c/espD |
| Rv3871/eccCb1 | (cc=0.9127) | info on Rv3871/eccCb1 |
| Rv3882c/eccE1 | (cc=0.9005) | info on Rv3882c/eccE1 |
| Rv3883c/mycP1 | (cc=0.8951) | info on Rv3883c/mycP1 |
| Rv3870/eccCa1 | (cc=0.8931) | info on Rv3870/eccCa1 |
| Rv3616c/espA | (cc=0.8784) | info on Rv3616c/espA |
| Rv3869/eccB1 | (cc=0.8729) | info on Rv3869/eccB1 |
| Rv3544c/fadE28 | (cc=0.8371) | info on Rv3544c/fadE28 |
| Rv3877/eccD1 | (cc=0.8359) | info on Rv3877/eccD1 |
| Rv3551/- | (cc=0.8327) | info on Rv3551/- |
Correlation of Rv3615c/espC with Rv3877/eccD1
Normalized LFCs for Rv3615c/espC:
(description and provenance of datasets)
| Rv3615c/espC | Rv3877/eccD1 | |
| Fe_supp_jason_reseq | -0.076 | 0.163 |
| low_pH_jason_reseq | -0.791 | -0.765 |
| NO_jason_reseq | -0.179 | -0.394 |
| B6_jason_reseq | -2.738 | -1.882 |
| MHCII_jason_reseq | -3.219 | -2.474 |
| Isoniazid02 | -1.534 | -1.077 |
| Rifampicin4 | 0.663 | -0.374 |
| Ethambutol3 | 0.61 | -0.709 |
| Meropenem3 | -0.927 | -0.231 |
| Vancomycin16 | -0.438 | -0.326 |
| Rv2680_day32 | -2.287 | -1.79 |
| H37Rv_KO_MarP | 0.763 | 1.308 |
| hypoxia_3wks | -0.642 | -0.494 |
| hypoxia_6wks | -0.453 | -0.203 |
| glycerol | -1.542 | -0.592 |
| cholesterol | -2.127 | 0.518 |
| AJ | -4.615 | -5.531 |
| Bibs02 | -6.0 | -5.865 |
| Bibs02c | -5.515 | -5.055 |
| BL6 | -1.925 | -2.388 |
| BL6a | -4.038 | -5.216 |
| BXD01 | -2.432 | -3.065 |
| BXD010 | -1.317 | -2.086 |
| BXD011 | -2.379 | -3.163 |
| BXD03 | -2.734 | -2.609 |
| BXD04 | -1.094 | -2.491 |
| BXD05 | -2.385 | -2.773 |
| BXD06 | -3.264 | -3.269 |
| BXD07 | -2.435 | -3.175 |
| BXD08 | -3.429 | -3.012 |
| BXD09 | -3.21 | -4.014 |
| CAST | -4.656 | -4.306 |
| CCcont | 0.08 | -0.524 |
| DS01 | -5.297 | -3.384 |
| DS02 | -6.0 | -4.43 |
| DS04 | -3.797 | -1.502 |
| DS0c | -6.0 | -5.627 |
| GP01 | -1.918 | -1.989 |
| GP02 | -2.771 | -2.669 |
| GP0c | -0.687 | -0.818 |
| NOD | -0.556 | -1.816 |
| NZO | -4.599 | -5.252 |
| PWK | -5.419 | -4.615 |
| H37Rv_KO_CtpC | -1.589 | -1.667 |
| H37Rv_KO_CtpD | -0.43 | -1.344 |
| H37Rv_KO_Rv1272 | -1.432 | -2.637 |
| H37Rv_KO_SugABC | -1.494 | -0.844 |
| H37Rv_KO_MbtN | 0.721 | 1.484 |
| Trans05 | -1.485 | -2.049 |
| macrophage_unactivated | -1.203 | -0.707 |
| IL1 | -0.303 | -0.03 |
| Rapamycin | -0.761 | 0.236 |
| Tcell | -2.278 | -1.685 |
| GMCSF | 0.887 | 0.227 |
| IFNab | 0.629 | 1.729 |
| IFNg | -1.924 | -0.853 |
| IFNg_GMCSF1 | -1.304 | -0.742 |
| Rv1432_day32 | -2.181 | -2.764 |
| Rv1565c_day32 | -3.023 | -3.428 |
| secA2_input | 0.844 | -0.715 |
| delta_Rv3594 | 0.45 | -0.112 |
| delta_Rv3717 | -0.276 | -0.234 |
| delta_Rv3811 | -0.611 | 0.149 |
| delta_Rv0954 | 0.062 | -0.059 |
| PonA1 | -1.032 | -0.452 |
| EccD1_KO | -0.247 | -6.0 |
| EspI_KO | -0.639 | 0.682 |
| PE35_KO | -0.096 | 0.878 |
| PPE68_KO | -0.403 | 0.726 |
| glycerol2 | 0.556 | 0.388 |
| lignocerate | 0.544 | 0.901 |
| oleate | -0.103 | 0.089 |
| phosphatidylcholine | -0.066 | 0.422 |
| acetate | -0.146 | 0.066 |
| glucAc | -0.122 | 0.041 |
| Rv0950ko | -0.256 | 0.519 |
| Rv1096ko | -1.122 | 0.112 |
| Rv3684ko | -0.668 | 0.406 |
| delta_otsA_trehalose | 1.448 | -0.191 |