Top 10 genes with highest correlation to Rv3615c/espC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3614c/espD | (cc=0.9176) | info on Rv3614c/espD |
| Rv3871/eccCb1 | (cc=0.9127) | info on Rv3871/eccCb1 |
| Rv3882c/eccE1 | (cc=0.9005) | info on Rv3882c/eccE1 |
| Rv3883c/mycP1 | (cc=0.8951) | info on Rv3883c/mycP1 |
| Rv3870/eccCa1 | (cc=0.8931) | info on Rv3870/eccCa1 |
| Rv3616c/espA | (cc=0.8784) | info on Rv3616c/espA |
| Rv3869/eccB1 | (cc=0.8729) | info on Rv3869/eccB1 |
| Rv3544c/fadE28 | (cc=0.8371) | info on Rv3544c/fadE28 |
| Rv3877/eccD1 | (cc=0.8359) | info on Rv3877/eccD1 |
| Rv3551/- | (cc=0.8327) | info on Rv3551/- |
Correlation of Rv3615c/espC with Rv3616c/espA
Normalized LFCs for Rv3615c/espC:
(description and provenance of datasets)
| Rv3615c/espC | Rv3616c/espA | |
| Fe_supp_jason_reseq | -0.076 | 0.087 |
| low_pH_jason_reseq | -0.791 | -0.775 |
| NO_jason_reseq | -0.179 | -1.278 |
| B6_jason_reseq | -2.738 | -3.09 |
| MHCII_jason_reseq | -3.219 | -2.722 |
| Isoniazid02 | -1.534 | 0.476 |
| Rifampicin4 | 0.663 | 0.241 |
| Ethambutol3 | 0.61 | -0.018 |
| Meropenem3 | -0.927 | 0.789 |
| Vancomycin16 | -0.438 | -0.18 |
| Rv2680_day32 | -2.287 | -1.717 |
| H37Rv_KO_MarP | 0.763 | 0.381 |
| hypoxia_3wks | -0.642 | 0.024 |
| hypoxia_6wks | -0.453 | -0.098 |
| glycerol | -1.542 | -1.435 |
| cholesterol | -2.127 | -1.373 |
| AJ | -4.615 | -4.551 |
| Bibs02 | -6.0 | -4.346 |
| Bibs02c | -5.515 | -4.142 |
| BL6 | -1.925 | -3.453 |
| BL6a | -4.038 | -4.605 |
| BXD01 | -2.432 | -3.648 |
| BXD010 | -1.317 | -2.883 |
| BXD011 | -2.379 | -2.961 |
| BXD03 | -2.734 | -3.143 |
| BXD04 | -1.094 | -3.155 |
| BXD05 | -2.385 | -2.17 |
| BXD06 | -3.264 | -3.908 |
| BXD07 | -2.435 | -3.771 |
| BXD08 | -3.429 | -3.672 |
| BXD09 | -3.21 | -4.181 |
| CAST | -4.656 | -5.474 |
| CCcont | 0.08 | -1.136 |
| DS01 | -5.297 | -6.0 |
| DS02 | -6.0 | -5.764 |
| DS04 | -3.797 | -3.671 |
| DS0c | -6.0 | -5.466 |
| GP01 | -1.918 | -3.404 |
| GP02 | -2.771 | -2.752 |
| GP0c | -0.687 | -1.597 |
| NOD | -0.556 | -1.995 |
| NZO | -4.599 | -5.358 |
| PWK | -5.419 | -5.836 |
| H37Rv_KO_CtpC | -1.589 | -2.684 |
| H37Rv_KO_CtpD | -0.43 | -2.791 |
| H37Rv_KO_Rv1272 | -1.432 | -1.864 |
| H37Rv_KO_SugABC | -1.494 | -1.092 |
| H37Rv_KO_MbtN | 0.721 | 0.118 |
| Trans05 | -1.485 | -1.933 |
| macrophage_unactivated | -1.203 | -0.079 |
| IL1 | -0.303 | 1.35 |
| Rapamycin | -0.761 | -0.037 |
| Tcell | -2.278 | -0.841 |
| GMCSF | 0.887 | 2.094 |
| IFNab | 0.629 | 1.321 |
| IFNg | -1.924 | -1.109 |
| IFNg_GMCSF1 | -1.304 | -0.628 |
| Rv1432_day32 | -2.181 | -2.926 |
| Rv1565c_day32 | -3.023 | -3.852 |
| secA2_input | 0.844 | -0.211 |
| delta_Rv3594 | 0.45 | 0.101 |
| delta_Rv3717 | -0.276 | -0.448 |
| delta_Rv3811 | -0.611 | -0.094 |
| delta_Rv0954 | 0.062 | -1.009 |
| PonA1 | -1.032 | -1.103 |
| EccD1_KO | -0.247 | 0.135 |
| EspI_KO | -0.639 | 0.342 |
| PE35_KO | -0.096 | -0.502 |
| PPE68_KO | -0.403 | -0.618 |
| glycerol2 | 0.556 | 2.046 |
| lignocerate | 0.544 | 0.645 |
| oleate | -0.103 | 0.305 |
| phosphatidylcholine | -0.066 | 1.689 |
| acetate | -0.146 | -0.362 |
| glucAc | -0.122 | -0.715 |
| Rv0950ko | -0.256 | 0.326 |
| Rv1096ko | -1.122 | -0.199 |
| Rv3684ko | -0.668 | 0.174 |
| delta_otsA_trehalose | 1.448 | -0.88 |