Top 10 genes with highest correlation to Rv3615c/espC:
update plot | correlation | link to info on gene |
---|---|---|
Rv3614c/espD | (cc=0.9176) | info on Rv3614c/espD |
Rv3871/eccCb1 | (cc=0.9127) | info on Rv3871/eccCb1 |
Rv3882c/eccE1 | (cc=0.9005) | info on Rv3882c/eccE1 |
Rv3883c/mycP1 | (cc=0.8951) | info on Rv3883c/mycP1 |
Rv3870/eccCa1 | (cc=0.8931) | info on Rv3870/eccCa1 |
Rv3616c/espA | (cc=0.8784) | info on Rv3616c/espA |
Rv3869/eccB1 | (cc=0.8729) | info on Rv3869/eccB1 |
Rv3544c/fadE28 | (cc=0.8371) | info on Rv3544c/fadE28 |
Rv3877/eccD1 | (cc=0.8359) | info on Rv3877/eccD1 |
Rv3551/- | (cc=0.8327) | info on Rv3551/- |
Correlation of Rv3615c/espC with Rv3871/eccCb1
Normalized LFCs for Rv3615c/espC:
(description and provenance of datasets)
Rv3615c/espC | Rv3871/eccCb1 | |
Fe_supp_jason_reseq | -0.076 | -0.256 |
low_pH_jason_reseq | -0.791 | -0.375 |
NO_jason_reseq | -0.179 | 0.189 |
B6_jason_reseq | -2.738 | -2.391 |
MHCII_jason_reseq | -3.219 | -3.223 |
Isoniazid02 | -1.534 | -0.394 |
Rifampicin4 | 0.663 | -0.639 |
Ethambutol3 | 0.61 | 0.623 |
Meropenem3 | -0.927 | -0.077 |
Vancomycin16 | -0.438 | -0.573 |
Rv2680_day32 | -2.287 | -1.865 |
H37Rv_KO_MarP | 0.763 | 1.569 |
hypoxia_3wks | -0.642 | 0.239 |
hypoxia_6wks | -0.453 | 0.413 |
glycerol | -1.542 | -0.415 |
cholesterol | -2.127 | 0.035 |
AJ | -4.615 | -3.714 |
Bibs02 | -6.0 | -4.951 |
Bibs02c | -5.515 | -4.28 |
BL6 | -1.925 | -1.666 |
BL6a | -4.038 | -4.183 |
BXD01 | -2.432 | -2.459 |
BXD010 | -1.317 | -2.418 |
BXD011 | -2.379 | -2.78 |
BXD03 | -2.734 | -2.629 |
BXD04 | -1.094 | -2.893 |
BXD05 | -2.385 | -2.873 |
BXD06 | -3.264 | -3.463 |
BXD07 | -2.435 | -3.09 |
BXD08 | -3.429 | -3.074 |
BXD09 | -3.21 | -3.696 |
CAST | -4.656 | -4.97 |
CCcont | 0.08 | -0.915 |
DS01 | -5.297 | -3.653 |
DS02 | -6.0 | -4.911 |
DS04 | -3.797 | -2.055 |
DS0c | -6.0 | -5.705 |
GP01 | -1.918 | -1.9 |
GP02 | -2.771 | -2.439 |
GP0c | -0.687 | -0.366 |
NOD | -0.556 | -2.198 |
NZO | -4.599 | -4.452 |
PWK | -5.419 | -5.476 |
H37Rv_KO_CtpC | -1.589 | -2.03 |
H37Rv_KO_CtpD | -0.43 | -0.75 |
H37Rv_KO_Rv1272 | -1.432 | -1.577 |
H37Rv_KO_SugABC | -1.494 | -0.315 |
H37Rv_KO_MbtN | 0.721 | 0.548 |
Trans05 | -1.485 | -1.279 |
macrophage_unactivated | -1.203 | -1.187 |
IL1 | -0.303 | -0.839 |
Rapamycin | -0.761 | -0.703 |
Tcell | -2.278 | -1.714 |
GMCSF | 0.887 | 0.845 |
IFNab | 0.629 | 1.569 |
IFNg | -1.924 | -1.978 |
IFNg_GMCSF1 | -1.304 | -1.181 |
Rv1432_day32 | -2.181 | -2.946 |
Rv1565c_day32 | -3.023 | -3.502 |
secA2_input | 0.844 | -0.337 |
delta_Rv3594 | 0.45 | -0.015 |
delta_Rv3717 | -0.276 | -1.033 |
delta_Rv3811 | -0.611 | -0.617 |
delta_Rv0954 | 0.062 | -0.079 |
PonA1 | -1.032 | -0.382 |
EccD1_KO | -0.247 | 0.493 |
EspI_KO | -0.639 | 0.291 |
PE35_KO | -0.096 | -0.19 |
PPE68_KO | -0.403 | 0.051 |
glycerol2 | 0.556 | 0.136 |
lignocerate | 0.544 | 0.105 |
oleate | -0.103 | 0.549 |
phosphatidylcholine | -0.066 | 0.43 |
acetate | -0.146 | -0.369 |
glucAc | -0.122 | -0.278 |
Rv0950ko | -0.256 | 0.32 |
Rv1096ko | -1.122 | -0.018 |
Rv3684ko | -0.668 | 0.111 |
delta_otsA_trehalose | 1.448 | 0.176 |