Top 10 genes with highest correlation to Rv3615c/espC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3614c/espD | (cc=0.9176) | info on Rv3614c/espD |
| Rv3871/eccCb1 | (cc=0.9127) | info on Rv3871/eccCb1 |
| Rv3882c/eccE1 | (cc=0.9005) | info on Rv3882c/eccE1 |
| Rv3883c/mycP1 | (cc=0.8951) | info on Rv3883c/mycP1 |
| Rv3870/eccCa1 | (cc=0.8931) | info on Rv3870/eccCa1 |
| Rv3616c/espA | (cc=0.8784) | info on Rv3616c/espA |
| Rv3869/eccB1 | (cc=0.8729) | info on Rv3869/eccB1 |
| Rv3544c/fadE28 | (cc=0.8371) | info on Rv3544c/fadE28 |
| Rv3877/eccD1 | (cc=0.8359) | info on Rv3877/eccD1 |
| Rv3551/- | (cc=0.8327) | info on Rv3551/- |
Correlation of Rv3615c/espC with Rv3614c/espD
Normalized LFCs for Rv3615c/espC:
(description and provenance of datasets)
| Rv3615c/espC | Rv3614c/espD | |
| Fe_supp_jason_reseq | -0.076 | -0.587 |
| low_pH_jason_reseq | -0.791 | -0.668 |
| NO_jason_reseq | -0.179 | -0.795 |
| B6_jason_reseq | -2.738 | -2.337 |
| MHCII_jason_reseq | -3.219 | -2.243 |
| Isoniazid02 | -1.534 | 0.007 |
| Rifampicin4 | 0.663 | -0.187 |
| Ethambutol3 | 0.61 | 0.499 |
| Meropenem3 | -0.927 | 0.052 |
| Vancomycin16 | -0.438 | 0.013 |
| Rv2680_day32 | -2.287 | -1.55 |
| H37Rv_KO_MarP | 0.763 | 1.281 |
| hypoxia_3wks | -0.642 | -0.159 |
| hypoxia_6wks | -0.453 | -1.084 |
| glycerol | -1.542 | -1.3 |
| cholesterol | -2.127 | -0.729 |
| AJ | -4.615 | -5.192 |
| Bibs02 | -6.0 | -5.457 |
| Bibs02c | -5.515 | -4.547 |
| BL6 | -1.925 | -1.299 |
| BL6a | -4.038 | -4.873 |
| BXD01 | -2.432 | -2.886 |
| BXD010 | -1.317 | -2.241 |
| BXD011 | -2.379 | -2.548 |
| BXD03 | -2.734 | -2.31 |
| BXD04 | -1.094 | -2.767 |
| BXD05 | -2.385 | -1.613 |
| BXD06 | -3.264 | -2.794 |
| BXD07 | -2.435 | -2.523 |
| BXD08 | -3.429 | -3.347 |
| BXD09 | -3.21 | -3.276 |
| CAST | -4.656 | -3.997 |
| CCcont | 0.08 | -0.378 |
| DS01 | -5.297 | -6.0 |
| DS02 | -6.0 | -6.0 |
| DS04 | -3.797 | -3.847 |
| DS0c | -6.0 | -5.276 |
| GP01 | -1.918 | -1.875 |
| GP02 | -2.771 | -2.344 |
| GP0c | -0.687 | -1.179 |
| NOD | -0.556 | 0.153 |
| NZO | -4.599 | -6.0 |
| PWK | -5.419 | -4.825 |
| H37Rv_KO_CtpC | -1.589 | -1.587 |
| H37Rv_KO_CtpD | -0.43 | -1.102 |
| H37Rv_KO_Rv1272 | -1.432 | -1.097 |
| H37Rv_KO_SugABC | -1.494 | -2.464 |
| H37Rv_KO_MbtN | 0.721 | 0.817 |
| Trans05 | -1.485 | -0.72 |
| macrophage_unactivated | -1.203 | -0.218 |
| IL1 | -0.303 | -0.148 |
| Rapamycin | -0.761 | -0.672 |
| Tcell | -2.278 | -1.235 |
| GMCSF | 0.887 | 0.016 |
| IFNab | 0.629 | 1.128 |
| IFNg | -1.924 | -1.098 |
| IFNg_GMCSF1 | -1.304 | 0.682 |
| Rv1432_day32 | -2.181 | -1.13 |
| Rv1565c_day32 | -3.023 | -3.097 |
| secA2_input | 0.844 | -0.873 |
| delta_Rv3594 | 0.45 | 0.242 |
| delta_Rv3717 | -0.276 | -0.596 |
| delta_Rv3811 | -0.611 | -0.433 |
| delta_Rv0954 | 0.062 | -0.437 |
| PonA1 | -1.032 | -1.641 |
| EccD1_KO | -0.247 | 0.572 |
| EspI_KO | -0.639 | 1.514 |
| PE35_KO | -0.096 | 1.082 |
| PPE68_KO | -0.403 | 1.222 |
| glycerol2 | 0.556 | 1.184 |
| lignocerate | 0.544 | 0.6 |
| oleate | -0.103 | 1.136 |
| phosphatidylcholine | -0.066 | 0.262 |
| acetate | -0.146 | -0.153 |
| glucAc | -0.122 | -0.228 |
| Rv0950ko | -0.256 | 0.485 |
| Rv1096ko | -1.122 | -0.6 |
| Rv3684ko | -0.668 | -0.766 |
| delta_otsA_trehalose | 1.448 | 0.89 |