Top 10 genes with highest correlation to Rv2714/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1109c/- | (cc=0.536) | info on Rv1109c/- |
| Rv2946c/pks1 | (cc=0.4534) | info on Rv2946c/pks1 |
| Rv2937/drrB | (cc=0.4507) | info on Rv2937/drrB |
| Rv0190/- | (cc=0.4395) | info on Rv0190/- |
| Rv2231c/cobC | (cc=0.4363) | info on Rv2231c/cobC |
| Rv2948c/fadD22 | (cc=0.4215) | info on Rv2948c/fadD22 |
| Rv0353/hspR | (cc=0.4206) | info on Rv0353/hspR |
| Rv2945c/lppX | (cc=0.4198) | info on Rv2945c/lppX |
| Rv2849c/cobO | (cc=0.4141) | info on Rv2849c/cobO |
| Rv3500c/yrbE4B | (cc=0.4123) | info on Rv3500c/yrbE4B |
Correlation of Rv2714/- with Rv2937/drrB
Normalized LFCs for Rv2714/-:
(description and provenance of datasets)
| Rv2714/- | Rv2937/drrB | |
| Fe_supp_jason_reseq | 0.635 | 0.259 |
| low_pH_jason_reseq | -0.157 | 0.93 |
| NO_jason_reseq | -0.722 | -2.77 |
| B6_jason_reseq | 0.515 | -1.599 |
| MHCII_jason_reseq | 0.029 | -1.823 |
| Isoniazid02 | 0.691 | 0.172 |
| Rifampicin4 | -0.523 | -0.328 |
| Ethambutol3 | 0.263 | 0.353 |
| Meropenem3 | 0.831 | 0.99 |
| Vancomycin16 | -0.777 | -0.462 |
| Rv2680_day32 | 0.343 | -2.235 |
| H37Rv_KO_MarP | -0.464 | -2.698 |
| hypoxia_3wks | -0.084 | 2.149 |
| hypoxia_6wks | 0.867 | 2.353 |
| glycerol | -1.63 | -0.799 |
| cholesterol | -0.299 | 1.802 |
| AJ | -2.227 | -3.817 |
| Bibs02 | -0.132 | -0.827 |
| Bibs02c | -0.227 | -0.828 |
| BL6 | 0.133 | 1.228 |
| BL6a | 0.055 | -0.175 |
| BXD01 | -0.46 | 1.26 |
| BXD010 | 0.58 | 1.349 |
| BXD011 | 0.489 | 0.599 |
| BXD03 | 0.189 | 0.56 |
| BXD04 | 1.054 | 0.761 |
| BXD05 | -0.175 | 0.201 |
| BXD06 | -0.159 | 0.586 |
| BXD07 | -0.033 | 0.396 |
| BXD08 | 0.77 | 1.188 |
| BXD09 | -0.323 | 0.186 |
| CAST | -1.93 | -1.872 |
| CCcont | -0.433 | 1.677 |
| DS01 | -0.421 | -0.358 |
| DS02 | -0.797 | -0.354 |
| DS04 | -0.586 | -1.054 |
| DS0c | -0.225 | -0.041 |
| GP01 | -0.117 | -1.538 |
| GP02 | -0.808 | -1.8 |
| GP0c | -1.062 | 0.547 |
| NOD | -2.293 | -1.606 |
| NZO | -2.217 | -2.659 |
| PWK | -1.123 | -2.899 |
| H37Rv_KO_CtpC | 3.155 | -0.807 |
| H37Rv_KO_CtpD | 0.453 | -0.688 |
| H37Rv_KO_Rv1272 | 0.668 | 0.792 |
| H37Rv_KO_SugABC | 0.699 | 1.115 |
| H37Rv_KO_MbtN | 0.768 | 1.261 |
| Trans05 | 0.45 | 1.007 |
| macrophage_unactivated | 0.584 | 0.278 |
| IL1 | 1.622 | -0.015 |
| Rapamycin | 0.709 | -1.0 |
| Tcell | 2.564 | 3.506 |
| GMCSF | -0.251 | -2.96 |
| IFNab | -1.315 | -1.279 |
| IFNg | 0.222 | -4.105 |
| IFNg_GMCSF1 | 0.082 | -4.267 |
| Rv1432_day32 | -1.296 | -4.562 |
| Rv1565c_day32 | -1.681 | -4.958 |
| secA2_input | 0.313 | -1.199 |
| delta_Rv3594 | 1.039 | -1.011 |
| delta_Rv3717 | 0.97 | -1.031 |
| delta_Rv3811 | 0.244 | -0.669 |
| delta_Rv0954 | 0.833 | -0.727 |
| PonA1 | 0.419 | -0.791 |
| EccD1_KO | -0.362 | -0.779 |
| EspI_KO | 0.394 | 0.185 |
| PE35_KO | -0.939 | -0.948 |
| PPE68_KO | -0.909 | -0.909 |
| glycerol2 | -0.654 | 0.472 |
| lignocerate | -0.734 | 0.416 |
| oleate | -0.605 | 0.51 |
| phosphatidylcholine | -0.104 | 0.58 |
| acetate | -0.647 | -0.786 |
| glucAc | -0.567 | -0.3 |
| Rv0950ko | -0.926 | -0.458 |
| Rv1096ko | -0.326 | 0.163 |
| Rv3684ko | -0.445 | -0.301 |
| delta_otsA_trehalose | 0.34 | -0.808 |