Top 10 genes with highest correlation to Rv2384/mbtA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2383c/mbtB | (cc=0.8615) | info on Rv2383c/mbtB |
| Rv2379c/mbtF | (cc=0.8557) | info on Rv2379c/mbtF |
| Rv2380c/mbtE | (cc=0.8361) | info on Rv2380c/mbtE |
| Rv2386c/mbtI | (cc=0.7739) | info on Rv2386c/mbtI |
| Rv2378c/mbtG | (cc=0.6739) | info on Rv2378c/mbtG |
| Rv1592c/- | (cc=0.6361) | info on Rv1592c/- |
| Rv0406c/- | (cc=0.62) | info on Rv0406c/- |
| Rv2381c/mbtD | (cc=0.6049) | info on Rv2381c/mbtD |
| Rv2563/- | (cc=0.5978) | info on Rv2563/- |
| Rv2564/glnQ | (cc=0.5907) | info on Rv2564/glnQ |
Correlation of Rv2384/mbtA with Rv2564/glnQ
Normalized LFCs for Rv2384/mbtA:
(description and provenance of datasets)
| Rv2384/mbtA | Rv2564/glnQ | |
| Fe_supp_jason_reseq | 0.696 | 2.013 |
| low_pH_jason_reseq | 0.323 | -0.333 |
| NO_jason_reseq | -0.583 | -1.853 |
| B6_jason_reseq | -0.538 | -1.519 |
| MHCII_jason_reseq | -0.474 | -0.932 |
| Isoniazid02 | -0.7 | 0.036 |
| Rifampicin4 | 0.19 | -2.134 |
| Ethambutol3 | -1.216 | 1.918 |
| Meropenem3 | -0.28 | 0.649 |
| Vancomycin16 | -0.265 | -0.578 |
| Rv2680_day32 | -2.469 | -2.923 |
| H37Rv_KO_MarP | 1.803 | 0.621 |
| hypoxia_3wks | -1.782 | -3.038 |
| hypoxia_6wks | -1.222 | -2.011 |
| glycerol | 0.727 | 0.676 |
| cholesterol | 0.91 | 0.44 |
| AJ | -0.471 | -3.514 |
| Bibs02 | -0.832 | -2.262 |
| Bibs02c | -0.587 | 0.652 |
| BL6 | -0.694 | -2.64 |
| BL6a | -0.901 | -1.086 |
| BXD01 | -0.723 | -3.107 |
| BXD010 | -0.711 | -1.829 |
| BXD011 | -0.707 | -2.911 |
| BXD03 | -0.75 | -1.721 |
| BXD04 | -0.686 | -2.264 |
| BXD05 | -0.747 | -3.076 |
| BXD06 | -0.607 | -2.714 |
| BXD07 | -0.768 | -2.716 |
| BXD08 | -0.738 | -2.704 |
| BXD09 | -0.78 | -3.352 |
| CAST | 0.137 | -0.429 |
| CCcont | -0.303 | 0.355 |
| DS01 | 2.712 | 2.322 |
| DS02 | 2.001 | 0.607 |
| DS04 | 2.062 | 2.805 |
| DS0c | 0.251 | 1.673 |
| GP01 | -0.548 | -2.355 |
| GP02 | -0.462 | -1.985 |
| GP0c | -0.721 | -3.102 |
| NOD | 0.0 | 0.552 |
| NZO | -0.727 | -2.766 |
| PWK | -0.55 | 1.212 |
| H37Rv_KO_CtpC | 0.438 | -0.95 |
| H37Rv_KO_CtpD | 0.075 | -0.764 |
| H37Rv_KO_Rv1272 | -0.783 | -1.846 |
| H37Rv_KO_SugABC | -0.55 | -1.5 |
| H37Rv_KO_MbtN | -0.469 | -1.952 |
| Trans05 | -0.725 | -2.986 |
| macrophage_unactivated | 0.436 | 0.947 |
| IL1 | 0.0 | -1.818 |
| Rapamycin | 0.0 | -0.543 |
| Tcell | 1.58 | 0.0 |
| GMCSF | 0.0 | 0.671 |
| IFNab | 0.0 | 0.163 |
| IFNg | 0.0 | -1.013 |
| IFNg_GMCSF1 | 0.826 | -0.179 |
| Rv1432_day32 | -0.343 | -3.206 |
| Rv1565c_day32 | 0.381 | -0.509 |
| secA2_input | 1.471 | -1.198 |
| delta_Rv3594 | -1.234 | -2.272 |
| delta_Rv3717 | -0.927 | -1.869 |
| delta_Rv3811 | -1.426 | -1.817 |
| delta_Rv0954 | 0.053 | 1.292 |
| PonA1 | -0.098 | 2.505 |
| EccD1_KO | 2.161 | 0.0 |
| EspI_KO | 1.452 | -0.274 |
| PE35_KO | 1.596 | 1.126 |
| PPE68_KO | 1.872 | 0.816 |
| glycerol2 | -0.82 | -1.572 |
| lignocerate | -0.591 | -0.049 |
| oleate | -0.829 | -2.139 |
| phosphatidylcholine | -0.679 | -0.874 |
| acetate | -1.342 | 1.119 |
| glucAc | -0.405 | 0.357 |
| Rv0950ko | 0.311 | 1.414 |
| Rv1096ko | 0.875 | 0.549 |
| Rv3684ko | 1.091 | 0.088 |
| delta_otsA_trehalose | 0.574 | 1.289 |