Top 10 genes with highest correlation to Rv2384/mbtA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2383c/mbtB | (cc=0.8615) | info on Rv2383c/mbtB |
| Rv2379c/mbtF | (cc=0.8557) | info on Rv2379c/mbtF |
| Rv2380c/mbtE | (cc=0.8361) | info on Rv2380c/mbtE |
| Rv2386c/mbtI | (cc=0.7739) | info on Rv2386c/mbtI |
| Rv2378c/mbtG | (cc=0.6739) | info on Rv2378c/mbtG |
| Rv1592c/- | (cc=0.6361) | info on Rv1592c/- |
| Rv0406c/- | (cc=0.62) | info on Rv0406c/- |
| Rv2381c/mbtD | (cc=0.6049) | info on Rv2381c/mbtD |
| Rv2563/- | (cc=0.5978) | info on Rv2563/- |
| Rv2564/glnQ | (cc=0.5907) | info on Rv2564/glnQ |
Correlation of Rv2384/mbtA with Rv2378c/mbtG
Normalized LFCs for Rv2384/mbtA:
(description and provenance of datasets)
| Rv2384/mbtA | Rv2378c/mbtG | |
| Fe_supp_jason_reseq | 0.696 | 1.645 |
| low_pH_jason_reseq | 0.323 | 0.137 |
| NO_jason_reseq | -0.583 | -0.735 |
| B6_jason_reseq | -0.538 | -0.85 |
| MHCII_jason_reseq | -0.474 | -0.614 |
| Isoniazid02 | -0.7 | 0.764 |
| Rifampicin4 | 0.19 | -0.712 |
| Ethambutol3 | -1.216 | 2.112 |
| Meropenem3 | -0.28 | -0.587 |
| Vancomycin16 | -0.265 | 0.385 |
| Rv2680_day32 | -2.469 | -3.19 |
| H37Rv_KO_MarP | 1.803 | 1.565 |
| hypoxia_3wks | -1.782 | -2.46 |
| hypoxia_6wks | -1.222 | -1.718 |
| glycerol | 0.727 | 1.862 |
| cholesterol | 0.91 | 0.435 |
| AJ | -0.471 | -0.983 |
| Bibs02 | -0.832 | -1.673 |
| Bibs02c | -0.587 | -1.707 |
| BL6 | -0.694 | 0.053 |
| BL6a | -0.901 | -0.377 |
| BXD01 | -0.723 | -1.062 |
| BXD010 | -0.711 | -0.179 |
| BXD011 | -0.707 | -0.923 |
| BXD03 | -0.75 | -1.237 |
| BXD04 | -0.686 | 0.559 |
| BXD05 | -0.747 | 0.314 |
| BXD06 | -0.607 | 0.111 |
| BXD07 | -0.768 | -0.264 |
| BXD08 | -0.738 | -0.4 |
| BXD09 | -0.78 | -0.901 |
| CAST | 0.137 | 0.192 |
| CCcont | -0.303 | 0.399 |
| DS01 | 2.712 | 2.779 |
| DS02 | 2.001 | 1.479 |
| DS04 | 2.062 | 0.932 |
| DS0c | 0.251 | 0.181 |
| GP01 | -0.548 | -0.903 |
| GP02 | -0.462 | -0.761 |
| GP0c | -0.721 | -1.19 |
| NOD | 0.0 | -0.809 |
| NZO | -0.727 | -0.718 |
| PWK | -0.55 | -0.706 |
| H37Rv_KO_CtpC | 0.438 | -0.585 |
| H37Rv_KO_CtpD | 0.075 | -0.456 |
| H37Rv_KO_Rv1272 | -0.783 | -0.508 |
| H37Rv_KO_SugABC | -0.55 | -0.42 |
| H37Rv_KO_MbtN | -0.469 | -0.747 |
| Trans05 | -0.725 | -1.066 |
| macrophage_unactivated | 0.436 | -0.193 |
| IL1 | 0.0 | 1.231 |
| Rapamycin | 0.0 | -0.592 |
| Tcell | 1.58 | 0.375 |
| GMCSF | 0.0 | -0.694 |
| IFNab | 0.0 | 0.0 |
| IFNg | 0.0 | 0.454 |
| IFNg_GMCSF1 | 0.826 | 2.083 |
| Rv1432_day32 | -0.343 | -1.027 |
| Rv1565c_day32 | 0.381 | 1.93 |
| secA2_input | 1.471 | 1.758 |
| delta_Rv3594 | -1.234 | -1.172 |
| delta_Rv3717 | -0.927 | 0.413 |
| delta_Rv3811 | -1.426 | -1.709 |
| delta_Rv0954 | 0.053 | 0.509 |
| PonA1 | -0.098 | 0.945 |
| EccD1_KO | 2.161 | 1.684 |
| EspI_KO | 1.452 | 2.031 |
| PE35_KO | 1.596 | 2.444 |
| PPE68_KO | 1.872 | 3.248 |
| glycerol2 | -0.82 | 1.073 |
| lignocerate | -0.591 | 1.464 |
| oleate | -0.829 | 0.373 |
| phosphatidylcholine | -0.679 | 1.073 |
| acetate | -1.342 | 1.127 |
| glucAc | -0.405 | 1.825 |
| Rv0950ko | 0.311 | 1.58 |
| Rv1096ko | 0.875 | 0.347 |
| Rv3684ko | 1.091 | 0.468 |
| delta_otsA_trehalose | 0.574 | 0.492 |