Top 10 genes with highest correlation to Rv2384/mbtA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2383c/mbtB | (cc=0.8615) | info on Rv2383c/mbtB |
| Rv2379c/mbtF | (cc=0.8557) | info on Rv2379c/mbtF |
| Rv2380c/mbtE | (cc=0.8361) | info on Rv2380c/mbtE |
| Rv2386c/mbtI | (cc=0.7739) | info on Rv2386c/mbtI |
| Rv2378c/mbtG | (cc=0.6739) | info on Rv2378c/mbtG |
| Rv1592c/- | (cc=0.6361) | info on Rv1592c/- |
| Rv0406c/- | (cc=0.62) | info on Rv0406c/- |
| Rv2381c/mbtD | (cc=0.6049) | info on Rv2381c/mbtD |
| Rv2563/- | (cc=0.5978) | info on Rv2563/- |
| Rv2564/glnQ | (cc=0.5907) | info on Rv2564/glnQ |
Correlation of Rv2384/mbtA with Rv2383c/mbtB
Normalized LFCs for Rv2384/mbtA:
(description and provenance of datasets)
| Rv2384/mbtA | Rv2383c/mbtB | |
| Fe_supp_jason_reseq | 0.696 | 1.163 |
| low_pH_jason_reseq | 0.323 | 1.506 |
| NO_jason_reseq | -0.583 | -0.541 |
| B6_jason_reseq | -0.538 | -0.649 |
| MHCII_jason_reseq | -0.474 | -0.572 |
| Isoniazid02 | -0.7 | -0.076 |
| Rifampicin4 | 0.19 | 0.512 |
| Ethambutol3 | -1.216 | 0.458 |
| Meropenem3 | -0.28 | -0.612 |
| Vancomycin16 | -0.265 | -0.207 |
| Rv2680_day32 | -2.469 | -1.693 |
| H37Rv_KO_MarP | 1.803 | 1.146 |
| hypoxia_3wks | -1.782 | -2.759 |
| hypoxia_6wks | -1.222 | -2.234 |
| glycerol | 0.727 | 1.271 |
| cholesterol | 0.91 | 0.8 |
| AJ | -0.471 | -1.037 |
| Bibs02 | -0.832 | -1.09 |
| Bibs02c | -0.587 | -1.423 |
| BL6 | -0.694 | -1.089 |
| BL6a | -0.901 | -1.181 |
| BXD01 | -0.723 | -1.004 |
| BXD010 | -0.711 | -1.115 |
| BXD011 | -0.707 | -1.109 |
| BXD03 | -0.75 | -1.177 |
| BXD04 | -0.686 | -0.953 |
| BXD05 | -0.747 | -1.172 |
| BXD06 | -0.607 | -0.796 |
| BXD07 | -0.768 | -1.206 |
| BXD08 | -0.738 | -1.158 |
| BXD09 | -0.78 | -1.224 |
| CAST | 0.137 | 0.102 |
| CCcont | -0.303 | -0.219 |
| DS01 | 2.712 | 2.917 |
| DS02 | 2.001 | 1.141 |
| DS04 | 2.062 | 0.964 |
| DS0c | 0.251 | -0.101 |
| GP01 | -0.548 | -0.761 |
| GP02 | -0.462 | -0.724 |
| GP0c | -0.721 | -1.002 |
| NOD | 0.0 | 0.195 |
| NZO | -0.727 | -0.757 |
| PWK | -0.55 | -0.745 |
| H37Rv_KO_CtpC | 0.438 | -0.075 |
| H37Rv_KO_CtpD | 0.075 | -0.4 |
| H37Rv_KO_Rv1272 | -0.783 | -1.228 |
| H37Rv_KO_SugABC | -0.55 | -0.674 |
| H37Rv_KO_MbtN | -0.469 | -0.614 |
| Trans05 | -0.725 | -1.138 |
| macrophage_unactivated | 0.436 | 1.098 |
| IL1 | 0.0 | 0.0 |
| Rapamycin | 0.0 | 0.0 |
| Tcell | 1.58 | 2.809 |
| GMCSF | 0.0 | 0.0 |
| IFNab | 0.0 | -0.417 |
| IFNg | 0.0 | -0.369 |
| IFNg_GMCSF1 | 0.826 | 0.757 |
| Rv1432_day32 | -0.343 | -0.343 |
| Rv1565c_day32 | 0.381 | 1.3 |
| secA2_input | 1.471 | 1.586 |
| delta_Rv3594 | -1.234 | -1.432 |
| delta_Rv3717 | -0.927 | -1.178 |
| delta_Rv3811 | -1.426 | -1.392 |
| delta_Rv0954 | 0.053 | -0.087 |
| PonA1 | -0.098 | 0.624 |
| EccD1_KO | 2.161 | 1.875 |
| EspI_KO | 1.452 | 0.582 |
| PE35_KO | 1.596 | 2.226 |
| PPE68_KO | 1.872 | 2.188 |
| glycerol2 | -0.82 | -0.779 |
| lignocerate | -0.591 | -0.577 |
| oleate | -0.829 | -0.457 |
| phosphatidylcholine | -0.679 | -0.451 |
| acetate | -1.342 | 0.185 |
| glucAc | -0.405 | -0.49 |
| Rv0950ko | 0.311 | -0.109 |
| Rv1096ko | 0.875 | 0.208 |
| Rv3684ko | 1.091 | 0.0 |
| delta_otsA_trehalose | 0.574 | -0.539 |