Top 10 genes with highest correlation to Rv0877/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3842c/glpQ1 | (cc=0.6509) | info on Rv3842c/glpQ1 |
| Rv1336/cysM | (cc=0.5937) | info on Rv1336/cysM |
| Rv0047c/- | (cc=0.5907) | info on Rv0047c/- |
| Rv1616/- | (cc=0.5568) | info on Rv1616/- |
| Rv2721c/- | (cc=0.5564) | info on Rv2721c/- |
| Rv1386/PE15 | (cc=0.5563) | info on Rv1386/PE15 |
| Rv0644c/mmaA2 | (cc=0.5514) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.5477) | info on Rv0645c/mmaA1 |
| Rv1239c/corA | (cc=0.5454) | info on Rv1239c/corA |
| Rv1334/mec | (cc=0.5384) | info on Rv1334/mec |
Correlation of Rv0877/- with Rv3842c/glpQ1
Normalized LFCs for Rv0877/-:
(description and provenance of datasets)
| Rv0877/- | Rv3842c/glpQ1 | |
| Fe_supp_jason_reseq | -1.639 | -2.242 |
| low_pH_jason_reseq | 0.724 | 0.574 |
| NO_jason_reseq | 3.305 | 3.631 |
| B6_jason_reseq | 1.22 | 1.38 |
| MHCII_jason_reseq | -2.252 | -0.853 |
| Isoniazid02 | 5.11 | 0.288 |
| Rifampicin4 | 0.566 | -0.33 |
| Ethambutol3 | 1.454 | 2.837 |
| Meropenem3 | 1.624 | -0.259 |
| Vancomycin16 | -0.239 | 0.146 |
| Rv2680_day32 | 1.68 | 1.647 |
| H37Rv_KO_MarP | -1.421 | -1.617 |
| hypoxia_3wks | 0.79 | -1.519 |
| hypoxia_6wks | 3.067 | 1.675 |
| glycerol | -1.593 | 0.016 |
| cholesterol | -1.617 | -0.252 |
| AJ | -0.034 | 0.528 |
| Bibs02 | -1.644 | -0.551 |
| Bibs02c | -1.478 | -1.51 |
| BL6 | 1.26 | 1.67 |
| BL6a | 0.319 | 2.716 |
| BXD01 | 2.472 | 3.451 |
| BXD010 | 1.577 | 2.506 |
| BXD011 | 2.37 | 4.887 |
| BXD03 | 0.932 | 1.946 |
| BXD04 | 2.958 | 3.768 |
| BXD05 | 1.299 | 2.897 |
| BXD06 | 2.021 | 3.915 |
| BXD07 | 1.091 | 3.764 |
| BXD08 | 2.432 | 3.535 |
| BXD09 | 1.504 | 3.421 |
| CAST | 1.119 | 1.655 |
| CCcont | -0.938 | -0.279 |
| DS01 | -0.753 | -2.566 |
| DS02 | 0.744 | -3.052 |
| DS04 | 0.35 | -0.749 |
| DS0c | -1.092 | -1.941 |
| GP01 | -0.222 | 3.019 |
| GP02 | 1.341 | 2.711 |
| GP0c | 0.237 | 3.642 |
| NOD | 0.335 | 0.085 |
| NZO | 0.926 | 1.361 |
| PWK | 2.786 | 3.319 |
| H37Rv_KO_CtpC | 2.358 | -0.514 |
| H37Rv_KO_CtpD | 0.373 | 0.058 |
| H37Rv_KO_Rv1272 | 0.206 | 0.94 |
| H37Rv_KO_SugABC | 0.442 | 1.215 |
| H37Rv_KO_MbtN | 1.093 | 2.418 |
| Trans05 | 1.163 | 1.7 |
| macrophage_unactivated | -2.43 | -3.043 |
| IL1 | 0.264 | 0.409 |
| Rapamycin | -1.108 | -0.497 |
| Tcell | 0.6 | 0.378 |
| GMCSF | -0.708 | -2.764 |
| IFNab | -1.784 | -0.327 |
| IFNg | 0.345 | -1.139 |
| IFNg_GMCSF1 | 0.085 | -1.339 |
| Rv1432_day32 | 1.226 | 3.437 |
| Rv1565c_day32 | -2.51 | -3.047 |
| secA2_input | -0.238 | 0.528 |
| delta_Rv3594 | -1.713 | 0.229 |
| delta_Rv3717 | 0.111 | 2.504 |
| delta_Rv3811 | -2.104 | 1.028 |
| delta_Rv0954 | -1.55 | -2.01 |
| PonA1 | -1.43 | -2.098 |
| EccD1_KO | -0.493 | -1.687 |
| EspI_KO | -0.325 | -1.928 |
| PE35_KO | -1.642 | -2.091 |
| PPE68_KO | -1.417 | -2.278 |
| glycerol2 | 0.035 | 0.205 |
| lignocerate | -0.843 | -1.063 |
| oleate | 2.003 | -0.284 |
| phosphatidylcholine | -0.332 | -0.633 |
| acetate | -0.14 | -0.372 |
| glucAc | -0.315 | -0.425 |
| Rv0950ko | -0.018 | -1.08 |
| Rv1096ko | 0.199 | -0.935 |
| Rv3684ko | 1.064 | 0.521 |
| delta_otsA_trehalose | -0.393 | 0.282 |