Top 10 genes with highest correlation to Rv0877/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3842c/glpQ1 | (cc=0.6509) | info on Rv3842c/glpQ1 |
| Rv1336/cysM | (cc=0.5937) | info on Rv1336/cysM |
| Rv0047c/- | (cc=0.5907) | info on Rv0047c/- |
| Rv1616/- | (cc=0.5568) | info on Rv1616/- |
| Rv2721c/- | (cc=0.5564) | info on Rv2721c/- |
| Rv1386/PE15 | (cc=0.5563) | info on Rv1386/PE15 |
| Rv0644c/mmaA2 | (cc=0.5514) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.5477) | info on Rv0645c/mmaA1 |
| Rv1239c/corA | (cc=0.5454) | info on Rv1239c/corA |
| Rv1334/mec | (cc=0.5384) | info on Rv1334/mec |
Correlation of Rv0877/- with Rv0047c/-
Normalized LFCs for Rv0877/-:
(description and provenance of datasets)
| Rv0877/- | Rv0047c/- | |
| Fe_supp_jason_reseq | -1.639 | -2.182 |
| low_pH_jason_reseq | 0.724 | 3.995 |
| NO_jason_reseq | 3.305 | 4.009 |
| B6_jason_reseq | 1.22 | 1.375 |
| MHCII_jason_reseq | -2.252 | -1.004 |
| Isoniazid02 | 5.11 | -0.469 |
| Rifampicin4 | 0.566 | -1.519 |
| Ethambutol3 | 1.454 | 2.698 |
| Meropenem3 | 1.624 | -2.017 |
| Vancomycin16 | -0.239 | -0.854 |
| Rv2680_day32 | 1.68 | -1.555 |
| H37Rv_KO_MarP | -1.421 | -2.135 |
| hypoxia_3wks | 0.79 | -2.153 |
| hypoxia_6wks | 3.067 | 2.742 |
| glycerol | -1.593 | -1.292 |
| cholesterol | -1.617 | -3.05 |
| AJ | -0.034 | 0.064 |
| Bibs02 | -1.644 | -3.399 |
| Bibs02c | -1.478 | -4.636 |
| BL6 | 1.26 | 0.41 |
| BL6a | 0.319 | 0.393 |
| BXD01 | 2.472 | 2.796 |
| BXD010 | 1.577 | 1.211 |
| BXD011 | 2.37 | 4.624 |
| BXD03 | 0.932 | 0.258 |
| BXD04 | 2.958 | 1.291 |
| BXD05 | 1.299 | 2.518 |
| BXD06 | 2.021 | 2.981 |
| BXD07 | 1.091 | 2.316 |
| BXD08 | 2.432 | 3.78 |
| BXD09 | 1.504 | 1.297 |
| CAST | 1.119 | 0.205 |
| CCcont | -0.938 | -0.493 |
| DS01 | -0.753 | -5.234 |
| DS02 | 0.744 | -4.819 |
| DS04 | 0.35 | -2.339 |
| DS0c | -1.092 | -2.461 |
| GP01 | -0.222 | 3.121 |
| GP02 | 1.341 | 0.487 |
| GP0c | 0.237 | 2.218 |
| NOD | 0.335 | -2.125 |
| NZO | 0.926 | 0.558 |
| PWK | 2.786 | 2.998 |
| H37Rv_KO_CtpC | 2.358 | -2.455 |
| H37Rv_KO_CtpD | 0.373 | 0.102 |
| H37Rv_KO_Rv1272 | 0.206 | -0.797 |
| H37Rv_KO_SugABC | 0.442 | 2.067 |
| H37Rv_KO_MbtN | 1.093 | 2.182 |
| Trans05 | 1.163 | 0.836 |
| macrophage_unactivated | -2.43 | -4.129 |
| IL1 | 0.264 | 0.163 |
| Rapamycin | -1.108 | -2.403 |
| Tcell | 0.6 | 0.603 |
| GMCSF | -0.708 | -3.501 |
| IFNab | -1.784 | -1.294 |
| IFNg | 0.345 | -1.849 |
| IFNg_GMCSF1 | 0.085 | -2.24 |
| Rv1432_day32 | 1.226 | -0.013 |
| Rv1565c_day32 | -2.51 | -4.786 |
| secA2_input | -0.238 | 0.504 |
| delta_Rv3594 | -1.713 | -0.399 |
| delta_Rv3717 | 0.111 | 1.969 |
| delta_Rv3811 | -2.104 | 0.419 |
| delta_Rv0954 | -1.55 | -0.37 |
| PonA1 | -1.43 | -1.716 |
| EccD1_KO | -0.493 | -1.227 |
| EspI_KO | -0.325 | -0.824 |
| PE35_KO | -1.642 | -1.855 |
| PPE68_KO | -1.417 | -1.952 |
| glycerol2 | 0.035 | 1.351 |
| lignocerate | -0.843 | -1.002 |
| oleate | 2.003 | 0.543 |
| phosphatidylcholine | -0.332 | 0.011 |
| acetate | -0.14 | -0.69 |
| glucAc | -0.315 | -1.622 |
| Rv0950ko | -0.018 | -0.675 |
| Rv1096ko | 0.199 | -1.137 |
| Rv3684ko | 1.064 | 2.315 |
| delta_otsA_trehalose | -0.393 | -1.257 |