Top 10 genes with highest correlation to Rv0877/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3842c/glpQ1 | (cc=0.6509) | info on Rv3842c/glpQ1 |
| Rv1336/cysM | (cc=0.5937) | info on Rv1336/cysM |
| Rv0047c/- | (cc=0.5907) | info on Rv0047c/- |
| Rv1616/- | (cc=0.5568) | info on Rv1616/- |
| Rv2721c/- | (cc=0.5564) | info on Rv2721c/- |
| Rv1386/PE15 | (cc=0.5563) | info on Rv1386/PE15 |
| Rv0644c/mmaA2 | (cc=0.5514) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.5477) | info on Rv0645c/mmaA1 |
| Rv1239c/corA | (cc=0.5454) | info on Rv1239c/corA |
| Rv1334/mec | (cc=0.5384) | info on Rv1334/mec |
Correlation of Rv0877/- with Rv1334/mec
Normalized LFCs for Rv0877/-:
(description and provenance of datasets)
| Rv0877/- | Rv1334/mec | |
| Fe_supp_jason_reseq | -1.639 | -1.481 |
| low_pH_jason_reseq | 0.724 | -0.197 |
| NO_jason_reseq | 3.305 | 1.011 |
| B6_jason_reseq | 1.22 | -0.525 |
| MHCII_jason_reseq | -2.252 | -0.587 |
| Isoniazid02 | 5.11 | 1.746 |
| Rifampicin4 | 0.566 | 0.127 |
| Ethambutol3 | 1.454 | 0.078 |
| Meropenem3 | 1.624 | 0.642 |
| Vancomycin16 | -0.239 | 1.117 |
| Rv2680_day32 | 1.68 | 0.825 |
| H37Rv_KO_MarP | -1.421 | 0.268 |
| hypoxia_3wks | 0.79 | 1.826 |
| hypoxia_6wks | 3.067 | 2.462 |
| glycerol | -1.593 | 0.057 |
| cholesterol | -1.617 | 0.261 |
| AJ | -0.034 | -0.324 |
| Bibs02 | -1.644 | -0.542 |
| Bibs02c | -1.478 | 0.597 |
| BL6 | 1.26 | 0.722 |
| BL6a | 0.319 | 1.194 |
| BXD01 | 2.472 | 1.351 |
| BXD010 | 1.577 | 1.985 |
| BXD011 | 2.37 | 2.172 |
| BXD03 | 0.932 | 0.748 |
| BXD04 | 2.958 | 1.201 |
| BXD05 | 1.299 | 1.843 |
| BXD06 | 2.021 | 1.645 |
| BXD07 | 1.091 | 1.663 |
| BXD08 | 2.432 | 1.376 |
| BXD09 | 1.504 | 1.363 |
| CAST | 1.119 | -0.813 |
| CCcont | -0.938 | -0.134 |
| DS01 | -0.753 | -0.987 |
| DS02 | 0.744 | -1.089 |
| DS04 | 0.35 | -0.523 |
| DS0c | -1.092 | -0.137 |
| GP01 | -0.222 | 0.192 |
| GP02 | 1.341 | 0.74 |
| GP0c | 0.237 | 1.04 |
| NOD | 0.335 | 0.151 |
| NZO | 0.926 | 0.325 |
| PWK | 2.786 | -0.176 |
| H37Rv_KO_CtpC | 2.358 | -0.648 |
| H37Rv_KO_CtpD | 0.373 | -0.362 |
| H37Rv_KO_Rv1272 | 0.206 | 0.7 |
| H37Rv_KO_SugABC | 0.442 | 1.725 |
| H37Rv_KO_MbtN | 1.093 | 1.499 |
| Trans05 | 1.163 | 0.873 |
| macrophage_unactivated | -2.43 | -2.108 |
| IL1 | 0.264 | 1.356 |
| Rapamycin | -1.108 | -0.384 |
| Tcell | 0.6 | -0.609 |
| GMCSF | -0.708 | -1.04 |
| IFNab | -1.784 | 0.46 |
| IFNg | 0.345 | 0.182 |
| IFNg_GMCSF1 | 0.085 | 0.053 |
| Rv1432_day32 | 1.226 | 0.245 |
| Rv1565c_day32 | -2.51 | -0.828 |
| secA2_input | -0.238 | 0.204 |
| delta_Rv3594 | -1.713 | 0.704 |
| delta_Rv3717 | 0.111 | 2.015 |
| delta_Rv3811 | -2.104 | 1.691 |
| delta_Rv0954 | -1.55 | -0.207 |
| PonA1 | -1.43 | -0.103 |
| EccD1_KO | -0.493 | -0.957 |
| EspI_KO | -0.325 | -1.001 |
| PE35_KO | -1.642 | -1.149 |
| PPE68_KO | -1.417 | -1.085 |
| glycerol2 | 0.035 | -0.82 |
| lignocerate | -0.843 | -2.169 |
| oleate | 2.003 | 1.965 |
| phosphatidylcholine | -0.332 | -1.476 |
| acetate | -0.14 | -0.755 |
| glucAc | -0.315 | -0.862 |
| Rv0950ko | -0.018 | -0.473 |
| Rv1096ko | 0.199 | 0.03 |
| Rv3684ko | 1.064 | 0.321 |
| delta_otsA_trehalose | -0.393 | 0.117 |