Top 10 genes with highest correlation to Rv0877/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3842c/glpQ1 | (cc=0.6509) | info on Rv3842c/glpQ1 |
| Rv1336/cysM | (cc=0.5937) | info on Rv1336/cysM |
| Rv0047c/- | (cc=0.5907) | info on Rv0047c/- |
| Rv1616/- | (cc=0.5568) | info on Rv1616/- |
| Rv2721c/- | (cc=0.5564) | info on Rv2721c/- |
| Rv1386/PE15 | (cc=0.5563) | info on Rv1386/PE15 |
| Rv0644c/mmaA2 | (cc=0.5514) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.5477) | info on Rv0645c/mmaA1 |
| Rv1239c/corA | (cc=0.5454) | info on Rv1239c/corA |
| Rv1334/mec | (cc=0.5384) | info on Rv1334/mec |
Correlation of Rv0877/- with Rv0645c/mmaA1
Normalized LFCs for Rv0877/-:
(description and provenance of datasets)
| Rv0877/- | Rv0645c/mmaA1 | |
| Fe_supp_jason_reseq | -1.639 | 0.107 |
| low_pH_jason_reseq | 0.724 | 0.637 |
| NO_jason_reseq | 3.305 | 0.995 |
| B6_jason_reseq | 1.22 | 2.126 |
| MHCII_jason_reseq | -2.252 | 1.105 |
| Isoniazid02 | 5.11 | 0.914 |
| Rifampicin4 | 0.566 | -1.389 |
| Ethambutol3 | 1.454 | -0.306 |
| Meropenem3 | 1.624 | 0.21 |
| Vancomycin16 | -0.239 | -1.273 |
| Rv2680_day32 | 1.68 | 2.853 |
| H37Rv_KO_MarP | -1.421 | 0.066 |
| hypoxia_3wks | 0.79 | 0.49 |
| hypoxia_6wks | 3.067 | 2.583 |
| glycerol | -1.593 | -0.214 |
| cholesterol | -1.617 | -0.666 |
| AJ | -0.034 | -0.064 |
| Bibs02 | -1.644 | -0.715 |
| Bibs02c | -1.478 | -0.167 |
| BL6 | 1.26 | 1.596 |
| BL6a | 0.319 | 1.415 |
| BXD01 | 2.472 | 2.284 |
| BXD010 | 1.577 | 2.033 |
| BXD011 | 2.37 | 3.383 |
| BXD03 | 0.932 | 1.125 |
| BXD04 | 2.958 | 1.855 |
| BXD05 | 1.299 | 1.878 |
| BXD06 | 2.021 | 2.018 |
| BXD07 | 1.091 | 2.279 |
| BXD08 | 2.432 | 2.369 |
| BXD09 | 1.504 | 2.252 |
| CAST | 1.119 | 1.013 |
| CCcont | -0.938 | 0.102 |
| DS01 | -0.753 | -0.44 |
| DS02 | 0.744 | 0.296 |
| DS04 | 0.35 | -0.159 |
| DS0c | -1.092 | -0.822 |
| GP01 | -0.222 | 2.116 |
| GP02 | 1.341 | 2.451 |
| GP0c | 0.237 | 1.458 |
| NOD | 0.335 | 0.195 |
| NZO | 0.926 | 1.079 |
| PWK | 2.786 | 0.189 |
| H37Rv_KO_CtpC | 2.358 | 0.047 |
| H37Rv_KO_CtpD | 0.373 | 0.307 |
| H37Rv_KO_Rv1272 | 0.206 | 0.635 |
| H37Rv_KO_SugABC | 0.442 | 1.228 |
| H37Rv_KO_MbtN | 1.093 | 1.404 |
| Trans05 | 1.163 | 1.652 |
| macrophage_unactivated | -2.43 | -0.928 |
| IL1 | 0.264 | 0.457 |
| Rapamycin | -1.108 | -0.405 |
| Tcell | 0.6 | 0.613 |
| GMCSF | -0.708 | 0.066 |
| IFNab | -1.784 | -0.665 |
| IFNg | 0.345 | 0.684 |
| IFNg_GMCSF1 | 0.085 | 1.119 |
| Rv1432_day32 | 1.226 | 5.021 |
| Rv1565c_day32 | -2.51 | -0.164 |
| secA2_input | -0.238 | 0.194 |
| delta_Rv3594 | -1.713 | 0.736 |
| delta_Rv3717 | 0.111 | 2.551 |
| delta_Rv3811 | -2.104 | 1.344 |
| delta_Rv0954 | -1.55 | -0.438 |
| PonA1 | -1.43 | -0.88 |
| EccD1_KO | -0.493 | -0.799 |
| EspI_KO | -0.325 | -0.665 |
| PE35_KO | -1.642 | -1.24 |
| PPE68_KO | -1.417 | -1.206 |
| glycerol2 | 0.035 | 0.581 |
| lignocerate | -0.843 | 0.11 |
| oleate | 2.003 | 0.006 |
| phosphatidylcholine | -0.332 | 0.347 |
| acetate | -0.14 | 0.027 |
| glucAc | -0.315 | 0.549 |
| Rv0950ko | -0.018 | 0.404 |
| Rv1096ko | 0.199 | -0.29 |
| Rv3684ko | 1.064 | 0.501 |
| delta_otsA_trehalose | -0.393 | 0.573 |