Top 10 genes with highest correlation to Rv0877/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3842c/glpQ1 | (cc=0.6509) | info on Rv3842c/glpQ1 |
| Rv1336/cysM | (cc=0.5937) | info on Rv1336/cysM |
| Rv0047c/- | (cc=0.5907) | info on Rv0047c/- |
| Rv1616/- | (cc=0.5568) | info on Rv1616/- |
| Rv2721c/- | (cc=0.5564) | info on Rv2721c/- |
| Rv1386/PE15 | (cc=0.5563) | info on Rv1386/PE15 |
| Rv0644c/mmaA2 | (cc=0.5514) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.5477) | info on Rv0645c/mmaA1 |
| Rv1239c/corA | (cc=0.5454) | info on Rv1239c/corA |
| Rv1334/mec | (cc=0.5384) | info on Rv1334/mec |
Correlation of Rv0877/- with Rv1239c/corA
Normalized LFCs for Rv0877/-:
(description and provenance of datasets)
| Rv0877/- | Rv1239c/corA | |
| Fe_supp_jason_reseq | -1.639 | -0.69 |
| low_pH_jason_reseq | 0.724 | 1.064 |
| NO_jason_reseq | 3.305 | 1.433 |
| B6_jason_reseq | 1.22 | 0.087 |
| MHCII_jason_reseq | -2.252 | -1.266 |
| Isoniazid02 | 5.11 | 0.036 |
| Rifampicin4 | 0.566 | -0.625 |
| Ethambutol3 | 1.454 | 0.0 |
| Meropenem3 | 1.624 | -1.067 |
| Vancomycin16 | -0.239 | -0.459 |
| Rv2680_day32 | 1.68 | 0.318 |
| H37Rv_KO_MarP | -1.421 | 0.505 |
| hypoxia_3wks | 0.79 | -2.117 |
| hypoxia_6wks | 3.067 | 0.848 |
| glycerol | -1.593 | 0.984 |
| cholesterol | -1.617 | 0.04 |
| AJ | -0.034 | 1.869 |
| Bibs02 | -1.644 | -0.338 |
| Bibs02c | -1.478 | -0.69 |
| BL6 | 1.26 | 1.43 |
| BL6a | 0.319 | 2.099 |
| BXD01 | 2.472 | 2.917 |
| BXD010 | 1.577 | 2.38 |
| BXD011 | 2.37 | 3.779 |
| BXD03 | 0.932 | 2.051 |
| BXD04 | 2.958 | 3.404 |
| BXD05 | 1.299 | 2.764 |
| BXD06 | 2.021 | 3.273 |
| BXD07 | 1.091 | 2.452 |
| BXD08 | 2.432 | 3.451 |
| BXD09 | 1.504 | 2.319 |
| CAST | 1.119 | 3.712 |
| CCcont | -0.938 | 0.288 |
| DS01 | -0.753 | -0.732 |
| DS02 | 0.744 | -1.182 |
| DS04 | 0.35 | 0.132 |
| DS0c | -1.092 | -0.757 |
| GP01 | -0.222 | -0.288 |
| GP02 | 1.341 | 0.034 |
| GP0c | 0.237 | 0.251 |
| NOD | 0.335 | 1.23 |
| NZO | 0.926 | 2.164 |
| PWK | 2.786 | 4.489 |
| H37Rv_KO_CtpC | 2.358 | 0.494 |
| H37Rv_KO_CtpD | 0.373 | 1.213 |
| H37Rv_KO_Rv1272 | 0.206 | 1.06 |
| H37Rv_KO_SugABC | 0.442 | 1.269 |
| H37Rv_KO_MbtN | 1.093 | 0.732 |
| Trans05 | 1.163 | 1.737 |
| macrophage_unactivated | -2.43 | -2.257 |
| IL1 | 0.264 | -1.0 |
| Rapamycin | -1.108 | -2.427 |
| Tcell | 0.6 | 0.596 |
| GMCSF | -0.708 | -0.694 |
| IFNab | -1.784 | -2.013 |
| IFNg | 0.345 | -1.505 |
| IFNg_GMCSF1 | 0.085 | -2.017 |
| Rv1432_day32 | 1.226 | 0.731 |
| Rv1565c_day32 | -2.51 | -1.311 |
| secA2_input | -0.238 | -0.377 |
| delta_Rv3594 | -1.713 | -0.234 |
| delta_Rv3717 | 0.111 | 0.766 |
| delta_Rv3811 | -2.104 | -1.084 |
| delta_Rv0954 | -1.55 | -0.596 |
| PonA1 | -1.43 | 0.792 |
| EccD1_KO | -0.493 | -0.72 |
| EspI_KO | -0.325 | -0.941 |
| PE35_KO | -1.642 | -0.998 |
| PPE68_KO | -1.417 | -0.893 |
| glycerol2 | 0.035 | -1.449 |
| lignocerate | -0.843 | -2.954 |
| oleate | 2.003 | -2.884 |
| phosphatidylcholine | -0.332 | -2.578 |
| acetate | -0.14 | -0.785 |
| glucAc | -0.315 | -1.674 |
| Rv0950ko | -0.018 | 1.447 |
| Rv1096ko | 0.199 | 0.072 |
| Rv3684ko | 1.064 | 1.601 |
| delta_otsA_trehalose | -0.393 | 0.147 |