Top 10 genes with highest correlation to Rv0877/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3842c/glpQ1 | (cc=0.6509) | info on Rv3842c/glpQ1 |
| Rv1336/cysM | (cc=0.5937) | info on Rv1336/cysM |
| Rv0047c/- | (cc=0.5907) | info on Rv0047c/- |
| Rv1616/- | (cc=0.5568) | info on Rv1616/- |
| Rv2721c/- | (cc=0.5564) | info on Rv2721c/- |
| Rv1386/PE15 | (cc=0.5563) | info on Rv1386/PE15 |
| Rv0644c/mmaA2 | (cc=0.5514) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.5477) | info on Rv0645c/mmaA1 |
| Rv1239c/corA | (cc=0.5454) | info on Rv1239c/corA |
| Rv1334/mec | (cc=0.5384) | info on Rv1334/mec |
Correlation of Rv0877/- with Rv1386/PE15
Normalized LFCs for Rv0877/-:
(description and provenance of datasets)
| Rv0877/- | Rv1386/PE15 | |
| Fe_supp_jason_reseq | -1.639 | -1.362 |
| low_pH_jason_reseq | 0.724 | -0.843 |
| NO_jason_reseq | 3.305 | -1.089 |
| B6_jason_reseq | 1.22 | 0.498 |
| MHCII_jason_reseq | -2.252 | -1.556 |
| Isoniazid02 | 5.11 | -0.748 |
| Rifampicin4 | 0.566 | 0.68 |
| Ethambutol3 | 1.454 | -0.547 |
| Meropenem3 | 1.624 | 0.139 |
| Vancomycin16 | -0.239 | -0.395 |
| Rv2680_day32 | 1.68 | 0.313 |
| H37Rv_KO_MarP | -1.421 | -2.023 |
| hypoxia_3wks | 0.79 | 1.332 |
| hypoxia_6wks | 3.067 | 2.063 |
| glycerol | -1.593 | -1.135 |
| cholesterol | -1.617 | -0.999 |
| AJ | -0.034 | -0.617 |
| Bibs02 | -1.644 | 0.082 |
| Bibs02c | -1.478 | -1.864 |
| BL6 | 1.26 | -0.727 |
| BL6a | 0.319 | 0.317 |
| BXD01 | 2.472 | 1.356 |
| BXD010 | 1.577 | 1.237 |
| BXD011 | 2.37 | 1.489 |
| BXD03 | 0.932 | 0.745 |
| BXD04 | 2.958 | 1.303 |
| BXD05 | 1.299 | 1.892 |
| BXD06 | 2.021 | 1.912 |
| BXD07 | 1.091 | 0.627 |
| BXD08 | 2.432 | 1.767 |
| BXD09 | 1.504 | 1.311 |
| CAST | 1.119 | 1.997 |
| CCcont | -0.938 | -0.812 |
| DS01 | -0.753 | -2.031 |
| DS02 | 0.744 | -1.739 |
| DS04 | 0.35 | 0.107 |
| DS0c | -1.092 | -1.673 |
| GP01 | -0.222 | 1.877 |
| GP02 | 1.341 | 1.883 |
| GP0c | 0.237 | 1.156 |
| NOD | 0.335 | 1.508 |
| NZO | 0.926 | -1.295 |
| PWK | 2.786 | 0.114 |
| H37Rv_KO_CtpC | 2.358 | 2.071 |
| H37Rv_KO_CtpD | 0.373 | 1.777 |
| H37Rv_KO_Rv1272 | 0.206 | 0.542 |
| H37Rv_KO_SugABC | 0.442 | 1.424 |
| H37Rv_KO_MbtN | 1.093 | 0.502 |
| Trans05 | 1.163 | 0.483 |
| macrophage_unactivated | -2.43 | -0.669 |
| IL1 | 0.264 | -1.735 |
| Rapamycin | -1.108 | -1.998 |
| Tcell | 0.6 | 0.723 |
| GMCSF | -0.708 | -0.412 |
| IFNab | -1.784 | -0.886 |
| IFNg | 0.345 | 0.192 |
| IFNg_GMCSF1 | 0.085 | 0.226 |
| Rv1432_day32 | 1.226 | 0.984 |
| Rv1565c_day32 | -2.51 | -1.099 |
| secA2_input | -0.238 | -2.109 |
| delta_Rv3594 | -1.713 | -0.817 |
| delta_Rv3717 | 0.111 | 0.999 |
| delta_Rv3811 | -2.104 | -0.596 |
| delta_Rv0954 | -1.55 | -1.097 |
| PonA1 | -1.43 | -1.627 |
| EccD1_KO | -0.493 | -0.898 |
| EspI_KO | -0.325 | -1.862 |
| PE35_KO | -1.642 | -1.502 |
| PPE68_KO | -1.417 | -1.565 |
| glycerol2 | 0.035 | -0.028 |
| lignocerate | -0.843 | -0.177 |
| oleate | 2.003 | -0.13 |
| phosphatidylcholine | -0.332 | 0.259 |
| acetate | -0.14 | -0.825 |
| glucAc | -0.315 | -0.649 |
| Rv0950ko | -0.018 | -0.314 |
| Rv1096ko | 0.199 | -0.775 |
| Rv3684ko | 1.064 | -0.858 |
| delta_otsA_trehalose | -0.393 | -1.238 |