Top 10 genes with highest correlation to Rv0758/phoR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0757/phoP | (cc=0.8487) | info on Rv0757/phoP |
| Rv2633c/- | (cc=0.7415) | info on Rv2633c/- |
| Rv3295/- | (cc=0.6728) | info on Rv3295/- |
| Rv0136/cyp138 | (cc=0.6485) | info on Rv0136/cyp138 |
| Rv3136A/- | (cc=0.6323) | info on Rv3136A/- |
| Rv1323/fadA4 | (cc=0.63) | info on Rv1323/fadA4 |
| Rv2474c/- | (cc=0.6177) | info on Rv2474c/- |
| Rv0043c/- | (cc=0.6163) | info on Rv0043c/- |
| Rv3058c/- | (cc=0.6161) | info on Rv3058c/- |
| Rv2681/- | (cc=0.6119) | info on Rv2681/- |
Correlation of Rv0758/phoR with Rv3295/-
Normalized LFCs for Rv0758/phoR:
(description and provenance of datasets)
| Rv0758/phoR | Rv3295/- | |
| Fe_supp_jason_reseq | 1.258 | -0.311 |
| low_pH_jason_reseq | 1.807 | -1.467 |
| NO_jason_reseq | -3.087 | 0.399 |
| B6_jason_reseq | 2.199 | 1.709 |
| MHCII_jason_reseq | -0.252 | 2.745 |
| Isoniazid02 | -3.111 | -0.08 |
| Rifampicin4 | -2.055 | -0.736 |
| Ethambutol3 | 0.276 | -0.766 |
| Meropenem3 | 2.037 | 1.594 |
| Vancomycin16 | -0.987 | -2.144 |
| Rv2680_day32 | 1.87 | -0.028 |
| H37Rv_KO_MarP | 4.04 | 0.872 |
| hypoxia_3wks | -1.519 | 0.04 |
| hypoxia_6wks | -3.418 | 0.069 |
| glycerol | -6.0 | -1.066 |
| cholesterol | -5.874 | -0.911 |
| AJ | -5.577 | -0.094 |
| Bibs02 | -3.968 | -0.197 |
| Bibs02c | -3.403 | -0.488 |
| BL6 | -5.388 | -1.617 |
| BL6a | -4.919 | -1.21 |
| BXD01 | -5.61 | -2.04 |
| BXD010 | -4.365 | -1.261 |
| BXD011 | -5.073 | -1.45 |
| BXD03 | -5.701 | -1.975 |
| BXD04 | -5.449 | -1.206 |
| BXD05 | -5.458 | -1.799 |
| BXD06 | -5.628 | -1.84 |
| BXD07 | -6.0 | -1.907 |
| BXD08 | -5.729 | -2.202 |
| BXD09 | -6.0 | -1.692 |
| CAST | -5.027 | -0.377 |
| CCcont | -3.151 | -2.55 |
| DS01 | -4.423 | -0.573 |
| DS02 | -2.169 | -0.243 |
| DS04 | -3.031 | -1.214 |
| DS0c | -3.204 | -0.159 |
| GP01 | -3.866 | -0.495 |
| GP02 | -3.314 | -1.862 |
| GP0c | -3.317 | -3.192 |
| NOD | -3.479 | 0.265 |
| NZO | -6.0 | 0.438 |
| PWK | -5.005 | -0.034 |
| H37Rv_KO_CtpC | -3.409 | -1.189 |
| H37Rv_KO_CtpD | -1.425 | -0.309 |
| H37Rv_KO_Rv1272 | -4.864 | -0.822 |
| H37Rv_KO_SugABC | -3.756 | -1.536 |
| H37Rv_KO_MbtN | -3.599 | -2.764 |
| Trans05 | -4.881 | -1.09 |
| macrophage_unactivated | -6.0 | -3.033 |
| IL1 | -4.942 | -2.637 |
| Rapamycin | -5.518 | -2.998 |
| Tcell | -6.0 | -2.77 |
| GMCSF | -6.0 | -2.389 |
| IFNab | -6.0 | -4.099 |
| IFNg | -6.0 | -1.86 |
| IFNg_GMCSF1 | -6.0 | -1.555 |
| Rv1432_day32 | 0.18 | 0.528 |
| Rv1565c_day32 | 2.088 | 1.414 |
| secA2_input | -1.115 | 0.819 |
| delta_Rv3594 | -5.632 | -0.159 |
| delta_Rv3717 | -3.301 | -0.35 |
| delta_Rv3811 | -5.661 | -0.437 |
| delta_Rv0954 | -0.881 | -0.012 |
| PonA1 | 1.487 | 0.697 |
| EccD1_KO | -1.973 | -0.536 |
| EspI_KO | -1.84 | -0.442 |
| PE35_KO | -0.058 | -0.096 |
| PPE68_KO | -0.976 | 0.067 |
| glycerol2 | -0.68 | 2.42 |
| lignocerate | 0.0 | 1.125 |
| oleate | 2.006 | -0.113 |
| phosphatidylcholine | 6.0 | 2.459 |
| acetate | -1.342 | 0.436 |
| glucAc | -0.964 | 0.323 |
| Rv0950ko | -0.296 | 1.019 |
| Rv1096ko | -0.296 | 0.338 |
| Rv3684ko | 0.301 | 0.907 |
| delta_otsA_trehalose | -1.214 | 0.261 |