Top 10 genes with highest correlation to Rv0758/phoR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0757/phoP | (cc=0.8487) | info on Rv0757/phoP |
| Rv2633c/- | (cc=0.7415) | info on Rv2633c/- |
| Rv3295/- | (cc=0.6728) | info on Rv3295/- |
| Rv0136/cyp138 | (cc=0.6485) | info on Rv0136/cyp138 |
| Rv3136A/- | (cc=0.6323) | info on Rv3136A/- |
| Rv1323/fadA4 | (cc=0.63) | info on Rv1323/fadA4 |
| Rv2474c/- | (cc=0.6177) | info on Rv2474c/- |
| Rv0043c/- | (cc=0.6163) | info on Rv0043c/- |
| Rv3058c/- | (cc=0.6161) | info on Rv3058c/- |
| Rv2681/- | (cc=0.6119) | info on Rv2681/- |
Correlation of Rv0758/phoR with Rv3136A/-
Normalized LFCs for Rv0758/phoR:
(description and provenance of datasets)
| Rv0758/phoR | Rv3136A/- | |
| Fe_supp_jason_reseq | 1.258 | 1.127 |
| low_pH_jason_reseq | 1.807 | -0.478 |
| NO_jason_reseq | -3.087 | 0.179 |
| B6_jason_reseq | 2.199 | 0.81 |
| MHCII_jason_reseq | -0.252 | 0.619 |
| Isoniazid02 | -3.111 | 2.03 |
| Rifampicin4 | -2.055 | 0.0 |
| Ethambutol3 | 0.276 | 2.81 |
| Meropenem3 | 2.037 | 2.511 |
| Vancomycin16 | -0.987 | -0.692 |
| Rv2680_day32 | 1.87 | 0.279 |
| H37Rv_KO_MarP | 4.04 | 1.388 |
| hypoxia_3wks | -1.519 | 0.231 |
| hypoxia_6wks | -3.418 | -0.898 |
| glycerol | -6.0 | -2.093 |
| cholesterol | -5.874 | -1.879 |
| AJ | -5.577 | -1.138 |
| Bibs02 | -3.968 | -0.8 |
| Bibs02c | -3.403 | -0.72 |
| BL6 | -5.388 | -1.346 |
| BL6a | -4.919 | -1.179 |
| BXD01 | -5.61 | -1.104 |
| BXD010 | -4.365 | -1.484 |
| BXD011 | -5.073 | -1.203 |
| BXD03 | -5.701 | -1.241 |
| BXD04 | -5.449 | -0.514 |
| BXD05 | -5.458 | -1.319 |
| BXD06 | -5.628 | -1.018 |
| BXD07 | -6.0 | -1.37 |
| BXD08 | -5.729 | -1.227 |
| BXD09 | -6.0 | -1.377 |
| CAST | -5.027 | -0.45 |
| CCcont | -3.151 | -1.683 |
| DS01 | -4.423 | -1.489 |
| DS02 | -2.169 | -0.975 |
| DS04 | -3.031 | -0.696 |
| DS0c | -3.204 | -1.326 |
| GP01 | -3.866 | -0.861 |
| GP02 | -3.314 | 0.397 |
| GP0c | -3.317 | -2.4 |
| NOD | -3.479 | -0.07 |
| NZO | -6.0 | -0.548 |
| PWK | -5.005 | -0.594 |
| H37Rv_KO_CtpC | -3.409 | -0.46 |
| H37Rv_KO_CtpD | -1.425 | -0.966 |
| H37Rv_KO_Rv1272 | -4.864 | -1.468 |
| H37Rv_KO_SugABC | -3.756 | -0.222 |
| H37Rv_KO_MbtN | -3.599 | -1.743 |
| Trans05 | -4.881 | -0.575 |
| macrophage_unactivated | -6.0 | -1.092 |
| IL1 | -4.942 | -1.071 |
| Rapamycin | -5.518 | -1.608 |
| Tcell | -6.0 | -0.678 |
| GMCSF | -6.0 | -0.782 |
| IFNab | -6.0 | -2.279 |
| IFNg | -6.0 | -1.208 |
| IFNg_GMCSF1 | -6.0 | -0.93 |
| Rv1432_day32 | 0.18 | 0.819 |
| Rv1565c_day32 | 2.088 | -0.333 |
| secA2_input | -1.115 | 0.161 |
| delta_Rv3594 | -5.632 | -0.344 |
| delta_Rv3717 | -3.301 | -1.354 |
| delta_Rv3811 | -5.661 | -0.413 |
| delta_Rv0954 | -0.881 | -0.16 |
| PonA1 | 1.487 | 0.132 |
| EccD1_KO | -1.973 | 0.151 |
| EspI_KO | -1.84 | -0.416 |
| PE35_KO | -0.058 | 0.925 |
| PPE68_KO | -0.976 | 0.771 |
| glycerol2 | -0.68 | 0.186 |
| lignocerate | 0.0 | -0.486 |
| oleate | 2.006 | 0.319 |
| phosphatidylcholine | 6.0 | -0.02 |
| acetate | -1.342 | 0.047 |
| glucAc | -0.964 | 0.104 |
| Rv0950ko | -0.296 | -0.422 |
| Rv1096ko | -0.296 | -0.648 |
| Rv3684ko | 0.301 | -1.215 |
| delta_otsA_trehalose | -1.214 | -0.196 |