Top 10 genes with highest correlation to Rv0758/phoR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0757/phoP | (cc=0.8487) | info on Rv0757/phoP |
| Rv2633c/- | (cc=0.7415) | info on Rv2633c/- |
| Rv3295/- | (cc=0.6728) | info on Rv3295/- |
| Rv0136/cyp138 | (cc=0.6485) | info on Rv0136/cyp138 |
| Rv3136A/- | (cc=0.6323) | info on Rv3136A/- |
| Rv1323/fadA4 | (cc=0.63) | info on Rv1323/fadA4 |
| Rv2474c/- | (cc=0.6177) | info on Rv2474c/- |
| Rv0043c/- | (cc=0.6163) | info on Rv0043c/- |
| Rv3058c/- | (cc=0.6161) | info on Rv3058c/- |
| Rv2681/- | (cc=0.6119) | info on Rv2681/- |
Correlation of Rv0758/phoR with Rv1323/fadA4
Normalized LFCs for Rv0758/phoR:
(description and provenance of datasets)
| Rv0758/phoR | Rv1323/fadA4 | |
| Fe_supp_jason_reseq | 1.258 | -0.66 |
| low_pH_jason_reseq | 1.807 | 0.457 |
| NO_jason_reseq | -3.087 | -1.097 |
| B6_jason_reseq | 2.199 | -0.71 |
| MHCII_jason_reseq | -0.252 | 0.604 |
| Isoniazid02 | -3.111 | 1.058 |
| Rifampicin4 | -2.055 | 0.425 |
| Ethambutol3 | 0.276 | 1.045 |
| Meropenem3 | 2.037 | 1.236 |
| Vancomycin16 | -0.987 | 0.982 |
| Rv2680_day32 | 1.87 | -0.734 |
| H37Rv_KO_MarP | 4.04 | 0.885 |
| hypoxia_3wks | -1.519 | -0.502 |
| hypoxia_6wks | -3.418 | -1.462 |
| glycerol | -6.0 | -0.047 |
| cholesterol | -5.874 | 0.055 |
| AJ | -5.577 | -0.376 |
| Bibs02 | -3.968 | -0.121 |
| Bibs02c | -3.403 | -0.02 |
| BL6 | -5.388 | -2.727 |
| BL6a | -4.919 | -1.342 |
| BXD01 | -5.61 | -2.864 |
| BXD010 | -4.365 | -2.137 |
| BXD011 | -5.073 | -3.063 |
| BXD03 | -5.701 | -2.196 |
| BXD04 | -5.449 | -2.652 |
| BXD05 | -5.458 | -2.511 |
| BXD06 | -5.628 | -2.77 |
| BXD07 | -6.0 | -2.721 |
| BXD08 | -5.729 | -3.027 |
| BXD09 | -6.0 | -2.917 |
| CAST | -5.027 | -0.868 |
| CCcont | -3.151 | -1.199 |
| DS01 | -4.423 | -0.592 |
| DS02 | -2.169 | -0.121 |
| DS04 | -3.031 | -1.566 |
| DS0c | -3.204 | -0.596 |
| GP01 | -3.866 | -1.94 |
| GP02 | -3.314 | -2.603 |
| GP0c | -3.317 | -3.04 |
| NOD | -3.479 | 0.628 |
| NZO | -6.0 | -1.753 |
| PWK | -5.005 | -0.521 |
| H37Rv_KO_CtpC | -3.409 | 0.172 |
| H37Rv_KO_CtpD | -1.425 | -0.962 |
| H37Rv_KO_Rv1272 | -4.864 | -2.119 |
| H37Rv_KO_SugABC | -3.756 | -0.711 |
| H37Rv_KO_MbtN | -3.599 | -1.156 |
| Trans05 | -4.881 | -1.482 |
| macrophage_unactivated | -6.0 | -1.496 |
| IL1 | -4.942 | -1.062 |
| Rapamycin | -5.518 | -1.495 |
| Tcell | -6.0 | -0.746 |
| GMCSF | -6.0 | -1.545 |
| IFNab | -6.0 | -1.433 |
| IFNg | -6.0 | -1.721 |
| IFNg_GMCSF1 | -6.0 | -0.377 |
| Rv1432_day32 | 0.18 | -0.724 |
| Rv1565c_day32 | 2.088 | 0.697 |
| secA2_input | -1.115 | 0.473 |
| delta_Rv3594 | -5.632 | 0.34 |
| delta_Rv3717 | -3.301 | -0.313 |
| delta_Rv3811 | -5.661 | 0.034 |
| delta_Rv0954 | -0.881 | 0.643 |
| PonA1 | 1.487 | 0.291 |
| EccD1_KO | -1.973 | 0.421 |
| EspI_KO | -1.84 | -0.051 |
| PE35_KO | -0.058 | 0.251 |
| PPE68_KO | -0.976 | 0.275 |
| glycerol2 | -0.68 | 0.586 |
| lignocerate | 0.0 | 1.196 |
| oleate | 2.006 | 0.303 |
| phosphatidylcholine | 6.0 | 0.847 |
| acetate | -1.342 | 0.74 |
| glucAc | -0.964 | 0.642 |
| Rv0950ko | -0.296 | 0.431 |
| Rv1096ko | -0.296 | 0.676 |
| Rv3684ko | 0.301 | 0.056 |
| delta_otsA_trehalose | -1.214 | -1.023 |