Top 10 genes with highest correlation to Rv0758/phoR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0757/phoP | (cc=0.8487) | info on Rv0757/phoP |
| Rv2633c/- | (cc=0.7415) | info on Rv2633c/- |
| Rv3295/- | (cc=0.6728) | info on Rv3295/- |
| Rv0136/cyp138 | (cc=0.6485) | info on Rv0136/cyp138 |
| Rv3136A/- | (cc=0.6323) | info on Rv3136A/- |
| Rv1323/fadA4 | (cc=0.63) | info on Rv1323/fadA4 |
| Rv2474c/- | (cc=0.6177) | info on Rv2474c/- |
| Rv0043c/- | (cc=0.6163) | info on Rv0043c/- |
| Rv3058c/- | (cc=0.6161) | info on Rv3058c/- |
| Rv2681/- | (cc=0.6119) | info on Rv2681/- |
Correlation of Rv0758/phoR with Rv2633c/-
Normalized LFCs for Rv0758/phoR:
(description and provenance of datasets)
| Rv0758/phoR | Rv2633c/- | |
| Fe_supp_jason_reseq | 1.258 | -0.311 |
| low_pH_jason_reseq | 1.807 | -1.37 |
| NO_jason_reseq | -3.087 | 1.982 |
| B6_jason_reseq | 2.199 | 2.097 |
| MHCII_jason_reseq | -0.252 | 2.688 |
| Isoniazid02 | -3.111 | -1.835 |
| Rifampicin4 | -2.055 | 0.788 |
| Ethambutol3 | 0.276 | -1.015 |
| Meropenem3 | 2.037 | 1.543 |
| Vancomycin16 | -0.987 | 0.992 |
| Rv2680_day32 | 1.87 | -1.492 |
| H37Rv_KO_MarP | 4.04 | -0.251 |
| hypoxia_3wks | -1.519 | -1.635 |
| hypoxia_6wks | -3.418 | -0.935 |
| glycerol | -6.0 | -3.439 |
| cholesterol | -5.874 | -1.698 |
| AJ | -5.577 | -1.847 |
| Bibs02 | -3.968 | -2.015 |
| Bibs02c | -3.403 | -1.479 |
| BL6 | -5.388 | -4.097 |
| BL6a | -4.919 | -2.705 |
| BXD01 | -5.61 | -3.305 |
| BXD010 | -4.365 | -2.545 |
| BXD011 | -5.073 | -3.454 |
| BXD03 | -5.701 | -4.022 |
| BXD04 | -5.449 | -3.05 |
| BXD05 | -5.458 | -3.466 |
| BXD06 | -5.628 | -3.175 |
| BXD07 | -6.0 | -3.925 |
| BXD08 | -5.729 | -3.425 |
| BXD09 | -6.0 | -3.938 |
| CAST | -5.027 | -1.121 |
| CCcont | -3.151 | -3.226 |
| DS01 | -4.423 | -2.479 |
| DS02 | -2.169 | -2.478 |
| DS04 | -3.031 | -1.739 |
| DS0c | -3.204 | -3.309 |
| GP01 | -3.866 | -2.635 |
| GP02 | -3.314 | -2.268 |
| GP0c | -3.317 | -3.348 |
| NOD | -3.479 | -0.823 |
| NZO | -6.0 | -1.331 |
| PWK | -5.005 | -1.07 |
| H37Rv_KO_CtpC | -3.409 | -4.742 |
| H37Rv_KO_CtpD | -1.425 | -1.586 |
| H37Rv_KO_Rv1272 | -4.864 | -3.011 |
| H37Rv_KO_SugABC | -3.756 | -1.628 |
| H37Rv_KO_MbtN | -3.599 | -2.419 |
| Trans05 | -4.881 | -2.951 |
| macrophage_unactivated | -6.0 | -5.293 |
| IL1 | -4.942 | -4.974 |
| Rapamycin | -5.518 | -5.146 |
| Tcell | -6.0 | -4.558 |
| GMCSF | -6.0 | -4.605 |
| IFNab | -6.0 | -6.0 |
| IFNg | -6.0 | -4.145 |
| IFNg_GMCSF1 | -6.0 | -4.452 |
| Rv1432_day32 | 0.18 | -1.082 |
| Rv1565c_day32 | 2.088 | -0.234 |
| secA2_input | -1.115 | -0.355 |
| delta_Rv3594 | -5.632 | 0.136 |
| delta_Rv3717 | -3.301 | -1.179 |
| delta_Rv3811 | -5.661 | -0.013 |
| delta_Rv0954 | -0.881 | 0.286 |
| PonA1 | 1.487 | 0.524 |
| EccD1_KO | -1.973 | -0.987 |
| EspI_KO | -1.84 | -0.337 |
| PE35_KO | -0.058 | 0.435 |
| PPE68_KO | -0.976 | 0.701 |
| glycerol2 | -0.68 | 2.304 |
| lignocerate | 0.0 | 2.288 |
| oleate | 2.006 | 1.324 |
| phosphatidylcholine | 6.0 | 6.0 |
| acetate | -1.342 | 1.057 |
| glucAc | -0.964 | 0.245 |
| Rv0950ko | -0.296 | -1.291 |
| Rv1096ko | -0.296 | -1.846 |
| Rv3684ko | 0.301 | -0.55 |
| delta_otsA_trehalose | -1.214 | -0.497 |