Top 10 genes with highest correlation to Rv0758/phoR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0757/phoP | (cc=0.8487) | info on Rv0757/phoP |
| Rv2633c/- | (cc=0.7415) | info on Rv2633c/- |
| Rv3295/- | (cc=0.6728) | info on Rv3295/- |
| Rv0136/cyp138 | (cc=0.6485) | info on Rv0136/cyp138 |
| Rv3136A/- | (cc=0.6323) | info on Rv3136A/- |
| Rv1323/fadA4 | (cc=0.63) | info on Rv1323/fadA4 |
| Rv2474c/- | (cc=0.6177) | info on Rv2474c/- |
| Rv0043c/- | (cc=0.6163) | info on Rv0043c/- |
| Rv3058c/- | (cc=0.6161) | info on Rv3058c/- |
| Rv2681/- | (cc=0.6119) | info on Rv2681/- |
Correlation of Rv0758/phoR with Rv0136/cyp138
Normalized LFCs for Rv0758/phoR:
(description and provenance of datasets)
| Rv0758/phoR | Rv0136/cyp138 | |
| Fe_supp_jason_reseq | 1.258 | -0.399 |
| low_pH_jason_reseq | 1.807 | 0.062 |
| NO_jason_reseq | -3.087 | -0.436 |
| B6_jason_reseq | 2.199 | 1.033 |
| MHCII_jason_reseq | -0.252 | 0.94 |
| Isoniazid02 | -3.111 | -0.674 |
| Rifampicin4 | -2.055 | 0.081 |
| Ethambutol3 | 0.276 | 0.119 |
| Meropenem3 | 2.037 | -0.53 |
| Vancomycin16 | -0.987 | -0.279 |
| Rv2680_day32 | 1.87 | 0.381 |
| H37Rv_KO_MarP | 4.04 | 0.604 |
| hypoxia_3wks | -1.519 | 0.108 |
| hypoxia_6wks | -3.418 | 0.601 |
| glycerol | -6.0 | -1.565 |
| cholesterol | -5.874 | -1.209 |
| AJ | -5.577 | 0.366 |
| Bibs02 | -3.968 | -0.246 |
| Bibs02c | -3.403 | -0.355 |
| BL6 | -5.388 | -0.418 |
| BL6a | -4.919 | -0.73 |
| BXD01 | -5.61 | -0.861 |
| BXD010 | -4.365 | -0.353 |
| BXD011 | -5.073 | -0.795 |
| BXD03 | -5.701 | -0.95 |
| BXD04 | -5.449 | -1.025 |
| BXD05 | -5.458 | -0.967 |
| BXD06 | -5.628 | -0.847 |
| BXD07 | -6.0 | -1.073 |
| BXD08 | -5.729 | -0.598 |
| BXD09 | -6.0 | -0.85 |
| CAST | -5.027 | 0.093 |
| CCcont | -3.151 | -1.132 |
| DS01 | -4.423 | -0.296 |
| DS02 | -2.169 | -0.961 |
| DS04 | -3.031 | -0.386 |
| DS0c | -3.204 | -0.368 |
| GP01 | -3.866 | -1.008 |
| GP02 | -3.314 | 0.164 |
| GP0c | -3.317 | -0.838 |
| NOD | -3.479 | 0.091 |
| NZO | -6.0 | 0.286 |
| PWK | -5.005 | 0.095 |
| H37Rv_KO_CtpC | -3.409 | -0.55 |
| H37Rv_KO_CtpD | -1.425 | -1.034 |
| H37Rv_KO_Rv1272 | -4.864 | -0.984 |
| H37Rv_KO_SugABC | -3.756 | -0.604 |
| H37Rv_KO_MbtN | -3.599 | 0.014 |
| Trans05 | -4.881 | 0.104 |
| macrophage_unactivated | -6.0 | -0.597 |
| IL1 | -4.942 | -1.258 |
| Rapamycin | -5.518 | -0.724 |
| Tcell | -6.0 | -0.929 |
| GMCSF | -6.0 | -0.378 |
| IFNab | -6.0 | -0.432 |
| IFNg | -6.0 | -0.919 |
| IFNg_GMCSF1 | -6.0 | -0.896 |
| Rv1432_day32 | 0.18 | 1.098 |
| Rv1565c_day32 | 2.088 | 0.655 |
| secA2_input | -1.115 | 0.792 |
| delta_Rv3594 | -5.632 | -0.737 |
| delta_Rv3717 | -3.301 | -0.788 |
| delta_Rv3811 | -5.661 | -0.446 |
| delta_Rv0954 | -0.881 | -0.342 |
| PonA1 | 1.487 | -0.11 |
| EccD1_KO | -1.973 | 0.115 |
| EspI_KO | -1.84 | 0.214 |
| PE35_KO | -0.058 | -0.166 |
| PPE68_KO | -0.976 | 0.09 |
| glycerol2 | -0.68 | 1.229 |
| lignocerate | 0.0 | 0.911 |
| oleate | 2.006 | 1.002 |
| phosphatidylcholine | 6.0 | 0.871 |
| acetate | -1.342 | 0.505 |
| glucAc | -0.964 | 0.432 |
| Rv0950ko | -0.296 | 0.268 |
| Rv1096ko | -0.296 | -0.045 |
| Rv3684ko | 0.301 | -0.18 |
| delta_otsA_trehalose | -1.214 | -0.022 |