Top 10 genes with highest correlation to Rv0758/phoR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0757/phoP | (cc=0.8487) | info on Rv0757/phoP |
| Rv2633c/- | (cc=0.7415) | info on Rv2633c/- |
| Rv3295/- | (cc=0.6728) | info on Rv3295/- |
| Rv0136/cyp138 | (cc=0.6485) | info on Rv0136/cyp138 |
| Rv3136A/- | (cc=0.6323) | info on Rv3136A/- |
| Rv1323/fadA4 | (cc=0.63) | info on Rv1323/fadA4 |
| Rv2474c/- | (cc=0.6177) | info on Rv2474c/- |
| Rv0043c/- | (cc=0.6163) | info on Rv0043c/- |
| Rv3058c/- | (cc=0.6161) | info on Rv3058c/- |
| Rv2681/- | (cc=0.6119) | info on Rv2681/- |
Correlation of Rv0758/phoR with Rv2474c/-
Normalized LFCs for Rv0758/phoR:
(description and provenance of datasets)
| Rv0758/phoR | Rv2474c/- | |
| Fe_supp_jason_reseq | 1.258 | -1.07 |
| low_pH_jason_reseq | 1.807 | 1.491 |
| NO_jason_reseq | -3.087 | -4.949 |
| B6_jason_reseq | 2.199 | -2.511 |
| MHCII_jason_reseq | -0.252 | -1.549 |
| Isoniazid02 | -3.111 | 2.023 |
| Rifampicin4 | -2.055 | 0.133 |
| Ethambutol3 | 0.276 | -0.062 |
| Meropenem3 | 2.037 | -0.558 |
| Vancomycin16 | -0.987 | 0.608 |
| Rv2680_day32 | 1.87 | -2.225 |
| H37Rv_KO_MarP | 4.04 | -0.34 |
| hypoxia_3wks | -1.519 | -0.411 |
| hypoxia_6wks | -3.418 | 0.814 |
| glycerol | -6.0 | -0.186 |
| cholesterol | -5.874 | -0.359 |
| AJ | -5.577 | -3.466 |
| Bibs02 | -3.968 | -1.298 |
| Bibs02c | -3.403 | -3.259 |
| BL6 | -5.388 | -2.563 |
| BL6a | -4.919 | -3.514 |
| BXD01 | -5.61 | -2.668 |
| BXD010 | -4.365 | -2.624 |
| BXD011 | -5.073 | -2.609 |
| BXD03 | -5.701 | -2.77 |
| BXD04 | -5.449 | -2.533 |
| BXD05 | -5.458 | -2.757 |
| BXD06 | -5.628 | -2.601 |
| BXD07 | -6.0 | -2.837 |
| BXD08 | -5.729 | -2.725 |
| BXD09 | -6.0 | -2.879 |
| CAST | -5.027 | -2.074 |
| CCcont | -3.151 | -1.017 |
| DS01 | -4.423 | -3.006 |
| DS02 | -2.169 | -1.884 |
| DS04 | -3.031 | -2.469 |
| DS0c | -3.204 | -0.706 |
| GP01 | -3.866 | -2.023 |
| GP02 | -3.314 | -1.705 |
| GP0c | -3.317 | -2.664 |
| NOD | -3.479 | -1.289 |
| NZO | -6.0 | -3.241 |
| PWK | -5.005 | -1.177 |
| H37Rv_KO_CtpC | -3.409 | -2.53 |
| H37Rv_KO_CtpD | -1.425 | -0.863 |
| H37Rv_KO_Rv1272 | -4.864 | -2.62 |
| H37Rv_KO_SugABC | -3.756 | -1.757 |
| H37Rv_KO_MbtN | -3.599 | -1.749 |
| Trans05 | -4.881 | -1.952 |
| macrophage_unactivated | -6.0 | -4.744 |
| IL1 | -4.942 | -4.458 |
| Rapamycin | -5.518 | -4.612 |
| Tcell | -6.0 | -3.848 |
| GMCSF | -6.0 | -3.662 |
| IFNab | -6.0 | -4.193 |
| IFNg | -6.0 | -4.017 |
| IFNg_GMCSF1 | -6.0 | -4.723 |
| Rv1432_day32 | 0.18 | 0.0 |
| Rv1565c_day32 | 2.088 | -1.703 |
| secA2_input | -1.115 | -0.348 |
| delta_Rv3594 | -5.632 | 0.428 |
| delta_Rv3717 | -3.301 | -0.438 |
| delta_Rv3811 | -5.661 | -0.518 |
| delta_Rv0954 | -0.881 | 1.91 |
| PonA1 | 1.487 | 2.086 |
| EccD1_KO | -1.973 | -0.296 |
| EspI_KO | -1.84 | 0.582 |
| PE35_KO | -0.058 | 1.397 |
| PPE68_KO | -0.976 | 1.43 |
| glycerol2 | -0.68 | 1.794 |
| lignocerate | 0.0 | 1.845 |
| oleate | 2.006 | 0.625 |
| phosphatidylcholine | 6.0 | 1.541 |
| acetate | -1.342 | 1.983 |
| glucAc | -0.964 | 1.806 |
| Rv0950ko | -0.296 | -0.691 |
| Rv1096ko | -0.296 | -1.004 |
| Rv3684ko | 0.301 | 1.11 |
| delta_otsA_trehalose | -1.214 | 0.0 |