Top 10 genes with highest correlation to Rv0758/phoR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0757/phoP | (cc=0.8487) | info on Rv0757/phoP |
| Rv2633c/- | (cc=0.7415) | info on Rv2633c/- |
| Rv3295/- | (cc=0.6728) | info on Rv3295/- |
| Rv0136/cyp138 | (cc=0.6485) | info on Rv0136/cyp138 |
| Rv3136A/- | (cc=0.6323) | info on Rv3136A/- |
| Rv1323/fadA4 | (cc=0.63) | info on Rv1323/fadA4 |
| Rv2474c/- | (cc=0.6177) | info on Rv2474c/- |
| Rv0043c/- | (cc=0.6163) | info on Rv0043c/- |
| Rv3058c/- | (cc=0.6161) | info on Rv3058c/- |
| Rv2681/- | (cc=0.6119) | info on Rv2681/- |
Correlation of Rv0758/phoR with Rv2681/-
Normalized LFCs for Rv0758/phoR:
(description and provenance of datasets)
| Rv0758/phoR | Rv2681/- | |
| Fe_supp_jason_reseq | 1.258 | 1.628 |
| low_pH_jason_reseq | 1.807 | 0.102 |
| NO_jason_reseq | -3.087 | -1.494 |
| B6_jason_reseq | 2.199 | -1.794 |
| MHCII_jason_reseq | -0.252 | 0.06 |
| Isoniazid02 | -3.111 | 1.116 |
| Rifampicin4 | -2.055 | 0.0 |
| Ethambutol3 | 0.276 | -0.528 |
| Meropenem3 | 2.037 | 0.074 |
| Vancomycin16 | -0.987 | -1.804 |
| Rv2680_day32 | 1.87 | -0.971 |
| H37Rv_KO_MarP | 4.04 | 1.769 |
| hypoxia_3wks | -1.519 | -0.969 |
| hypoxia_6wks | -3.418 | -1.355 |
| glycerol | -6.0 | 1.17 |
| cholesterol | -5.874 | -0.141 |
| AJ | -5.577 | -0.901 |
| Bibs02 | -3.968 | -0.624 |
| Bibs02c | -3.403 | -0.873 |
| BL6 | -5.388 | -2.702 |
| BL6a | -4.919 | -1.543 |
| BXD01 | -5.61 | -3.117 |
| BXD010 | -4.365 | -3.065 |
| BXD011 | -5.073 | -2.752 |
| BXD03 | -5.701 | -2.921 |
| BXD04 | -5.449 | -2.49 |
| BXD05 | -5.458 | -2.979 |
| BXD06 | -5.628 | -3.285 |
| BXD07 | -6.0 | -3.407 |
| BXD08 | -5.729 | -3.273 |
| BXD09 | -6.0 | -3.274 |
| CAST | -5.027 | -0.125 |
| CCcont | -3.151 | -1.248 |
| DS01 | -4.423 | 0.713 |
| DS02 | -2.169 | 1.419 |
| DS04 | -3.031 | 0.914 |
| DS0c | -3.204 | 0.369 |
| GP01 | -3.866 | -2.66 |
| GP02 | -3.314 | -2.4 |
| GP0c | -3.317 | -3.503 |
| NOD | -3.479 | -0.029 |
| NZO | -6.0 | -1.342 |
| PWK | -5.005 | 0.473 |
| H37Rv_KO_CtpC | -3.409 | -1.589 |
| H37Rv_KO_CtpD | -1.425 | -0.579 |
| H37Rv_KO_Rv1272 | -4.864 | -2.354 |
| H37Rv_KO_SugABC | -3.756 | -1.995 |
| H37Rv_KO_MbtN | -3.599 | -2.226 |
| Trans05 | -4.881 | -2.413 |
| macrophage_unactivated | -6.0 | -2.702 |
| IL1 | -4.942 | -3.197 |
| Rapamycin | -5.518 | -2.627 |
| Tcell | -6.0 | -2.789 |
| GMCSF | -6.0 | -3.063 |
| IFNab | -6.0 | -3.773 |
| IFNg | -6.0 | -3.1 |
| IFNg_GMCSF1 | -6.0 | -2.275 |
| Rv1432_day32 | 0.18 | -2.117 |
| Rv1565c_day32 | 2.088 | 0.625 |
| secA2_input | -1.115 | 0.518 |
| delta_Rv3594 | -5.632 | -2.518 |
| delta_Rv3717 | -3.301 | -3.253 |
| delta_Rv3811 | -5.661 | -2.858 |
| delta_Rv0954 | -0.881 | -0.079 |
| PonA1 | 1.487 | 0.705 |
| EccD1_KO | -1.973 | -0.066 |
| EspI_KO | -1.84 | 0.217 |
| PE35_KO | -0.058 | 0.432 |
| PPE68_KO | -0.976 | -0.39 |
| glycerol2 | -0.68 | 0.863 |
| lignocerate | 0.0 | -0.242 |
| oleate | 2.006 | -0.846 |
| phosphatidylcholine | 6.0 | 0.731 |
| acetate | -1.342 | 0.15 |
| glucAc | -0.964 | 1.115 |
| Rv0950ko | -0.296 | -0.482 |
| Rv1096ko | -0.296 | -0.57 |
| Rv3684ko | 0.301 | -0.91 |
| delta_otsA_trehalose | -1.214 | 1.041 |