Top 10 genes with highest correlation to Rv0465c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2564/glnQ | (cc=0.6485) | info on Rv2564/glnQ |
| Rv2563/- | (cc=0.6143) | info on Rv2563/- |
| Rv1657/argR | (cc=0.6059) | info on Rv1657/argR |
| Rv2739c/- | (cc=0.5717) | info on Rv2739c/- |
| Rv1287/- | (cc=0.5699) | info on Rv1287/- |
| Rv2681/- | (cc=0.5672) | info on Rv2681/- |
| Rv3412/- | (cc=0.5574) | info on Rv3412/- |
| Rv2258c/- | (cc=0.5573) | info on Rv2258c/- |
| Rv0406c/- | (cc=0.5522) | info on Rv0406c/- |
| Rv1323/fadA4 | (cc=0.5412) | info on Rv1323/fadA4 |
Correlation of Rv0465c/- with Rv2739c/-
Normalized LFCs for Rv0465c/-:
(description and provenance of datasets)
| Rv0465c/- | Rv2739c/- | |
| Fe_supp_jason_reseq | -0.262 | -0.819 |
| low_pH_jason_reseq | -1.584 | 2.498 |
| NO_jason_reseq | -1.764 | -2.371 |
| B6_jason_reseq | -4.054 | -2.335 |
| MHCII_jason_reseq | -2.419 | -1.151 |
| Isoniazid02 | -0.202 | 0.284 |
| Rifampicin4 | -0.276 | 0.956 |
| Ethambutol3 | 0.803 | 0.445 |
| Meropenem3 | 0.49 | -0.27 |
| Vancomycin16 | 0.204 | 1.38 |
| Rv2680_day32 | -3.876 | -0.947 |
| H37Rv_KO_MarP | 0.076 | -0.628 |
| hypoxia_3wks | 0.542 | -2.831 |
| hypoxia_6wks | -1.002 | -1.625 |
| glycerol | 0.753 | 1.41 |
| cholesterol | 4.059 | 1.049 |
| AJ | -2.266 | -1.741 |
| Bibs02 | -0.642 | 2.13 |
| Bibs02c | 0.596 | 1.32 |
| BL6 | -2.782 | -1.231 |
| BL6a | -0.521 | -0.27 |
| BXD01 | -2.852 | -1.921 |
| BXD010 | -2.113 | -1.438 |
| BXD011 | -2.747 | -1.636 |
| BXD03 | -1.251 | -1.623 |
| BXD04 | -1.107 | -1.588 |
| BXD05 | -2.859 | -1.85 |
| BXD06 | -2.229 | -1.835 |
| BXD07 | -2.942 | -2.042 |
| BXD08 | -2.167 | -1.596 |
| BXD09 | -3.227 | -1.805 |
| CAST | -1.201 | -2.266 |
| CCcont | -0.33 | 0.18 |
| DS01 | 0.527 | 0.388 |
| DS02 | -0.074 | 1.342 |
| DS04 | -0.275 | 0.871 |
| DS0c | 0.206 | 0.786 |
| GP01 | -2.267 | -1.456 |
| GP02 | -2.397 | -1.227 |
| GP0c | -3.195 | -1.561 |
| NOD | -0.53 | 0.166 |
| NZO | -2.471 | -1.117 |
| PWK | -0.894 | 1.471 |
| H37Rv_KO_CtpC | -1.124 | 1.092 |
| H37Rv_KO_CtpD | -0.417 | 1.055 |
| H37Rv_KO_Rv1272 | -2.217 | -2.08 |
| H37Rv_KO_SugABC | -1.503 | -0.852 |
| H37Rv_KO_MbtN | -1.564 | 1.419 |
| Trans05 | -2.583 | -0.571 |
| macrophage_unactivated | -0.29 | -0.682 |
| IL1 | -3.005 | -1.56 |
| Rapamycin | -0.586 | -1.614 |
| Tcell | -0.391 | -0.411 |
| GMCSF | -1.13 | -1.706 |
| IFNab | 0.807 | -0.653 |
| IFNg | -4.004 | -2.464 |
| IFNg_GMCSF1 | -3.881 | -2.03 |
| Rv1432_day32 | -3.94 | -2.511 |
| Rv1565c_day32 | 1.414 | 0.0 |
| secA2_input | 0.291 | -0.564 |
| delta_Rv3594 | -0.698 | -0.04 |
| delta_Rv3717 | -0.904 | -0.243 |
| delta_Rv3811 | -0.828 | 0.076 |
| delta_Rv0954 | -0.247 | -0.287 |
| PonA1 | -0.044 | -0.256 |
| EccD1_KO | -0.602 | 2.47 |
| EspI_KO | -0.108 | 1.383 |
| PE35_KO | 0.067 | 1.66 |
| PPE68_KO | -0.15 | 1.091 |
| glycerol2 | -0.841 | 1.401 |
| lignocerate | -0.818 | 2.097 |
| oleate | -0.927 | 0.0 |
| phosphatidylcholine | -1.634 | 0.679 |
| acetate | -0.424 | 1.273 |
| glucAc | -0.146 | 2.569 |
| Rv0950ko | 0.069 | -0.817 |
| Rv1096ko | -0.645 | -0.359 |
| Rv3684ko | -0.331 | -1.038 |
| delta_otsA_trehalose | 1.184 | 0.746 |