Top 10 genes with highest correlation to Rv0465c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2564/glnQ | (cc=0.6485) | info on Rv2564/glnQ |
| Rv2563/- | (cc=0.6143) | info on Rv2563/- |
| Rv1657/argR | (cc=0.6059) | info on Rv1657/argR |
| Rv2739c/- | (cc=0.5717) | info on Rv2739c/- |
| Rv1287/- | (cc=0.5699) | info on Rv1287/- |
| Rv2681/- | (cc=0.5672) | info on Rv2681/- |
| Rv3412/- | (cc=0.5574) | info on Rv3412/- |
| Rv2258c/- | (cc=0.5573) | info on Rv2258c/- |
| Rv0406c/- | (cc=0.5522) | info on Rv0406c/- |
| Rv1323/fadA4 | (cc=0.5412) | info on Rv1323/fadA4 |
Correlation of Rv0465c/- with Rv2563/-
Normalized LFCs for Rv0465c/-:
(description and provenance of datasets)
| Rv0465c/- | Rv2563/- | |
| Fe_supp_jason_reseq | -0.262 | 1.514 |
| low_pH_jason_reseq | -1.584 | 0.0 |
| NO_jason_reseq | -1.764 | -4.161 |
| B6_jason_reseq | -4.054 | -2.7 |
| MHCII_jason_reseq | -2.419 | -2.378 |
| Isoniazid02 | -0.202 | 0.677 |
| Rifampicin4 | -0.276 | -1.868 |
| Ethambutol3 | 0.803 | 2.152 |
| Meropenem3 | 0.49 | -1.269 |
| Vancomycin16 | 0.204 | -0.488 |
| Rv2680_day32 | -3.876 | -1.894 |
| H37Rv_KO_MarP | 0.076 | 0.364 |
| hypoxia_3wks | 0.542 | -2.939 |
| hypoxia_6wks | -1.002 | -3.627 |
| glycerol | 0.753 | 1.156 |
| cholesterol | 4.059 | 0.46 |
| AJ | -2.266 | -4.323 |
| Bibs02 | -0.642 | -0.13 |
| Bibs02c | 0.596 | -0.149 |
| BL6 | -2.782 | -2.974 |
| BL6a | -0.521 | -1.34 |
| BXD01 | -2.852 | -3.227 |
| BXD010 | -2.113 | -3.045 |
| BXD011 | -2.747 | -2.167 |
| BXD03 | -1.251 | -2.443 |
| BXD04 | -1.107 | -2.94 |
| BXD05 | -2.859 | -3.2 |
| BXD06 | -2.229 | -3.307 |
| BXD07 | -2.942 | -3.167 |
| BXD08 | -2.167 | -3.162 |
| BXD09 | -3.227 | -3.341 |
| CAST | -1.201 | -2.194 |
| CCcont | -0.33 | -0.754 |
| DS01 | 0.527 | 1.932 |
| DS02 | -0.074 | 1.281 |
| DS04 | -0.275 | 1.206 |
| DS0c | 0.206 | 1.634 |
| GP01 | -2.267 | -2.446 |
| GP02 | -2.397 | -2.061 |
| GP0c | -3.195 | -3.221 |
| NOD | -0.53 | -0.898 |
| NZO | -2.471 | -3.835 |
| PWK | -0.894 | 0.665 |
| H37Rv_KO_CtpC | -1.124 | -1.997 |
| H37Rv_KO_CtpD | -0.417 | -1.089 |
| H37Rv_KO_Rv1272 | -2.217 | -1.451 |
| H37Rv_KO_SugABC | -1.503 | -1.736 |
| H37Rv_KO_MbtN | -1.564 | -2.191 |
| Trans05 | -2.583 | -2.988 |
| macrophage_unactivated | -0.29 | 1.411 |
| IL1 | -3.005 | -1.64 |
| Rapamycin | -0.586 | -0.651 |
| Tcell | -0.391 | -1.212 |
| GMCSF | -1.13 | -1.212 |
| IFNab | 0.807 | 0.729 |
| IFNg | -4.004 | -2.028 |
| IFNg_GMCSF1 | -3.881 | -0.434 |
| Rv1432_day32 | -3.94 | -0.884 |
| Rv1565c_day32 | 1.414 | 2.504 |
| secA2_input | 0.291 | 0.127 |
| delta_Rv3594 | -0.698 | -2.496 |
| delta_Rv3717 | -0.904 | -2.054 |
| delta_Rv3811 | -0.828 | -2.427 |
| delta_Rv0954 | -0.247 | 2.344 |
| PonA1 | -0.044 | 2.92 |
| EccD1_KO | -0.602 | -0.743 |
| EspI_KO | -0.108 | 1.395 |
| PE35_KO | 0.067 | 2.013 |
| PPE68_KO | -0.15 | 1.67 |
| glycerol2 | -0.841 | -3.095 |
| lignocerate | -0.818 | -1.315 |
| oleate | -0.927 | -3.265 |
| phosphatidylcholine | -1.634 | -1.693 |
| acetate | -0.424 | -0.893 |
| glucAc | -0.146 | -0.881 |
| Rv0950ko | 0.069 | 0.841 |
| Rv1096ko | -0.645 | 1.013 |
| Rv3684ko | -0.331 | -0.079 |
| delta_otsA_trehalose | 1.184 | -1.192 |