Top 10 genes with highest correlation to Rv0465c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2564/glnQ | (cc=0.6485) | info on Rv2564/glnQ |
| Rv2563/- | (cc=0.6143) | info on Rv2563/- |
| Rv1657/argR | (cc=0.6059) | info on Rv1657/argR |
| Rv2739c/- | (cc=0.5717) | info on Rv2739c/- |
| Rv1287/- | (cc=0.5699) | info on Rv1287/- |
| Rv2681/- | (cc=0.5672) | info on Rv2681/- |
| Rv3412/- | (cc=0.5574) | info on Rv3412/- |
| Rv2258c/- | (cc=0.5573) | info on Rv2258c/- |
| Rv0406c/- | (cc=0.5522) | info on Rv0406c/- |
| Rv1323/fadA4 | (cc=0.5412) | info on Rv1323/fadA4 |
Correlation of Rv0465c/- with Rv2258c/-
Normalized LFCs for Rv0465c/-:
(description and provenance of datasets)
| Rv0465c/- | Rv2258c/- | |
| Fe_supp_jason_reseq | -0.262 | 0.57 |
| low_pH_jason_reseq | -1.584 | -0.47 |
| NO_jason_reseq | -1.764 | -0.564 |
| B6_jason_reseq | -4.054 | -1.085 |
| MHCII_jason_reseq | -2.419 | 0.032 |
| Isoniazid02 | -0.202 | 0.607 |
| Rifampicin4 | -0.276 | -0.097 |
| Ethambutol3 | 0.803 | 1.936 |
| Meropenem3 | 0.49 | 1.325 |
| Vancomycin16 | 0.204 | -0.233 |
| Rv2680_day32 | -3.876 | -0.169 |
| H37Rv_KO_MarP | 0.076 | 0.711 |
| hypoxia_3wks | 0.542 | -1.782 |
| hypoxia_6wks | -1.002 | -1.255 |
| glycerol | 0.753 | 1.934 |
| cholesterol | 4.059 | 1.239 |
| AJ | -2.266 | -0.435 |
| Bibs02 | -0.642 | 0.026 |
| Bibs02c | 0.596 | -0.741 |
| BL6 | -2.782 | -0.521 |
| BL6a | -0.521 | -0.934 |
| BXD01 | -2.852 | -1.145 |
| BXD010 | -2.113 | 0.009 |
| BXD011 | -2.747 | -0.869 |
| BXD03 | -1.251 | -0.079 |
| BXD04 | -1.107 | -0.95 |
| BXD05 | -2.859 | -1.205 |
| BXD06 | -2.229 | -0.839 |
| BXD07 | -2.942 | -1.127 |
| BXD08 | -2.167 | -0.854 |
| BXD09 | -3.227 | -1.235 |
| CAST | -1.201 | -0.574 |
| CCcont | -0.33 | 0.411 |
| DS01 | 0.527 | 0.21 |
| DS02 | -0.074 | 0.67 |
| DS04 | -0.275 | -1.026 |
| DS0c | 0.206 | -0.195 |
| GP01 | -2.267 | -1.126 |
| GP02 | -2.397 | -0.185 |
| GP0c | -3.195 | -0.461 |
| NOD | -0.53 | -1.033 |
| NZO | -2.471 | -0.629 |
| PWK | -0.894 | -0.561 |
| H37Rv_KO_CtpC | -1.124 | -0.184 |
| H37Rv_KO_CtpD | -0.417 | 0.728 |
| H37Rv_KO_Rv1272 | -2.217 | -0.486 |
| H37Rv_KO_SugABC | -1.503 | 0.738 |
| H37Rv_KO_MbtN | -1.564 | 0.267 |
| Trans05 | -2.583 | 0.256 |
| macrophage_unactivated | -0.29 | -0.155 |
| IL1 | -3.005 | -0.919 |
| Rapamycin | -0.586 | -0.23 |
| Tcell | -0.391 | 0.039 |
| GMCSF | -1.13 | 0.095 |
| IFNab | 0.807 | -0.227 |
| IFNg | -4.004 | -1.208 |
| IFNg_GMCSF1 | -3.881 | -1.166 |
| Rv1432_day32 | -3.94 | -0.347 |
| Rv1565c_day32 | 1.414 | 0.687 |
| secA2_input | 0.291 | -0.855 |
| delta_Rv3594 | -0.698 | -0.439 |
| delta_Rv3717 | -0.904 | -0.49 |
| delta_Rv3811 | -0.828 | -0.782 |
| delta_Rv0954 | -0.247 | 1.698 |
| PonA1 | -0.044 | 1.34 |
| EccD1_KO | -0.602 | 0.181 |
| EspI_KO | -0.108 | 0.342 |
| PE35_KO | 0.067 | 0.548 |
| PPE68_KO | -0.15 | 0.547 |
| glycerol2 | -0.841 | 0.258 |
| lignocerate | -0.818 | 0.371 |
| oleate | -0.927 | 0.099 |
| phosphatidylcholine | -1.634 | 0.126 |
| acetate | -0.424 | 0.321 |
| glucAc | -0.146 | 0.416 |
| Rv0950ko | 0.069 | 0.865 |
| Rv1096ko | -0.645 | 0.639 |
| Rv3684ko | -0.331 | -0.046 |
| delta_otsA_trehalose | 1.184 | 0.374 |