Top 10 genes with highest correlation to Rv0465c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2564/glnQ | (cc=0.6485) | info on Rv2564/glnQ |
| Rv2563/- | (cc=0.6143) | info on Rv2563/- |
| Rv1657/argR | (cc=0.6059) | info on Rv1657/argR |
| Rv2739c/- | (cc=0.5717) | info on Rv2739c/- |
| Rv1287/- | (cc=0.5699) | info on Rv1287/- |
| Rv2681/- | (cc=0.5672) | info on Rv2681/- |
| Rv3412/- | (cc=0.5574) | info on Rv3412/- |
| Rv2258c/- | (cc=0.5573) | info on Rv2258c/- |
| Rv0406c/- | (cc=0.5522) | info on Rv0406c/- |
| Rv1323/fadA4 | (cc=0.5412) | info on Rv1323/fadA4 |
Correlation of Rv0465c/- with Rv1287/-
Normalized LFCs for Rv0465c/-:
(description and provenance of datasets)
| Rv0465c/- | Rv1287/- | |
| Fe_supp_jason_reseq | -0.262 | 2.9 |
| low_pH_jason_reseq | -1.584 | 0.323 |
| NO_jason_reseq | -1.764 | -0.583 |
| B6_jason_reseq | -4.054 | 0.571 |
| MHCII_jason_reseq | -2.419 | 0.098 |
| Isoniazid02 | -0.202 | 0.805 |
| Rifampicin4 | -0.276 | -0.374 |
| Ethambutol3 | 0.803 | 0.822 |
| Meropenem3 | 0.49 | 0.633 |
| Vancomycin16 | 0.204 | -0.31 |
| Rv2680_day32 | -3.876 | -2.282 |
| H37Rv_KO_MarP | 0.076 | 0.24 |
| hypoxia_3wks | 0.542 | -2.999 |
| hypoxia_6wks | -1.002 | -2.714 |
| glycerol | 0.753 | -0.66 |
| cholesterol | 4.059 | 2.591 |
| AJ | -2.266 | -1.44 |
| Bibs02 | -0.642 | -0.309 |
| Bibs02c | 0.596 | -0.64 |
| BL6 | -2.782 | -2.144 |
| BL6a | -0.521 | -2.04 |
| BXD01 | -2.852 | -2.037 |
| BXD010 | -2.113 | -1.759 |
| BXD011 | -2.747 | -2.084 |
| BXD03 | -1.251 | -1.284 |
| BXD04 | -1.107 | -1.934 |
| BXD05 | -2.859 | -1.929 |
| BXD06 | -2.229 | -1.914 |
| BXD07 | -2.942 | -1.315 |
| BXD08 | -2.167 | -1.827 |
| BXD09 | -3.227 | -2.409 |
| CAST | -1.201 | -1.779 |
| CCcont | -0.33 | -0.729 |
| DS01 | 0.527 | -0.772 |
| DS02 | -0.074 | -0.758 |
| DS04 | -0.275 | -0.593 |
| DS0c | 0.206 | -0.069 |
| GP01 | -2.267 | -1.865 |
| GP02 | -2.397 | -1.654 |
| GP0c | -3.195 | -2.455 |
| NOD | -0.53 | -1.886 |
| NZO | -2.471 | -2.419 |
| PWK | -0.894 | -1.391 |
| H37Rv_KO_CtpC | -1.124 | 0.872 |
| H37Rv_KO_CtpD | -0.417 | -0.683 |
| H37Rv_KO_Rv1272 | -2.217 | -1.513 |
| H37Rv_KO_SugABC | -1.503 | -1.251 |
| H37Rv_KO_MbtN | -1.564 | -1.062 |
| Trans05 | -2.583 | -1.721 |
| macrophage_unactivated | -0.29 | -0.12 |
| IL1 | -3.005 | -1.967 |
| Rapamycin | -0.586 | -0.761 |
| Tcell | -0.391 | 0.358 |
| GMCSF | -1.13 | -0.776 |
| IFNab | 0.807 | 0.435 |
| IFNg | -4.004 | -1.179 |
| IFNg_GMCSF1 | -3.881 | -1.225 |
| Rv1432_day32 | -3.94 | -0.787 |
| Rv1565c_day32 | 1.414 | 3.074 |
| secA2_input | 0.291 | 0.023 |
| delta_Rv3594 | -0.698 | 2.232 |
| delta_Rv3717 | -0.904 | 0.81 |
| delta_Rv3811 | -0.828 | 0.779 |
| delta_Rv0954 | -0.247 | 4.017 |
| PonA1 | -0.044 | 1.101 |
| EccD1_KO | -0.602 | 1.151 |
| EspI_KO | -0.108 | 2.321 |
| PE35_KO | 0.067 | 1.473 |
| PPE68_KO | -0.15 | 2.342 |
| glycerol2 | -0.841 | -0.43 |
| lignocerate | -0.818 | 0.675 |
| oleate | -0.927 | -0.603 |
| phosphatidylcholine | -1.634 | -0.043 |
| acetate | -0.424 | 0.025 |
| glucAc | -0.146 | 0.122 |
| Rv0950ko | 0.069 | -0.045 |
| Rv1096ko | -0.645 | 0.353 |
| Rv3684ko | -0.331 | 1.484 |
| delta_otsA_trehalose | 1.184 | 1.312 |