Top 10 genes with highest correlation to Rv0455c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3274c/fadE25 | (cc=0.6419) | info on Rv3274c/fadE25 |
| Rv1379/pyrR | (cc=0.6323) | info on Rv1379/pyrR |
| Rv3588c/canB | (cc=0.531) | info on Rv3588c/canB |
| Rv1078/pra | (cc=0.5176) | info on Rv1078/pra |
| Rv2195/qcrA | (cc=0.5081) | info on Rv2195/qcrA |
| Rv2928/tesA | (cc=0.4896) | info on Rv2928/tesA |
| Rv3902c/- | (cc=0.4888) | info on Rv3902c/- |
| Rv1458c/- | (cc=0.4814) | info on Rv1458c/- |
| Rv2524c/fas | (cc=0.474) | info on Rv2524c/fas |
| Rv2941/fadD28 | (cc=0.4619) | info on Rv2941/fadD28 |
Correlation of Rv0455c/- with Rv1379/pyrR
Normalized LFCs for Rv0455c/-:
(description and provenance of datasets)
| Rv0455c/- | Rv1379/pyrR | |
| Fe_supp_jason_reseq | 3.939 | 1.778 |
| low_pH_jason_reseq | 0.211 | -0.231 |
| NO_jason_reseq | -0.362 | 0.331 |
| B6_jason_reseq | -0.153 | 0.386 |
| MHCII_jason_reseq | -0.135 | -0.135 |
| Isoniazid02 | 0.167 | 0.0 |
| Rifampicin4 | -0.341 | 0.0 |
| Ethambutol3 | 0.27 | 0.0 |
| Meropenem3 | 0.0 | -0.315 |
| Vancomycin16 | -0.334 | 0.305 |
| Rv2680_day32 | 0.0 | -0.359 |
| H37Rv_KO_MarP | 4.219 | 1.637 |
| hypoxia_3wks | -1.511 | -0.55 |
| hypoxia_6wks | -0.791 | 1.311 |
| glycerol | 0.0 | 0.686 |
| cholesterol | 0.0 | 0.112 |
| AJ | 0.0 | -0.637 |
| Bibs02 | 0.0 | -0.502 |
| Bibs02c | 0.0 | -0.574 |
| BL6 | 0.0 | -0.343 |
| BL6a | 0.0 | -0.544 |
| BXD01 | 0.0 | 1.045 |
| BXD010 | 0.0 | -0.352 |
| BXD011 | 0.54 | -0.35 |
| BXD03 | 0.0 | -0.113 |
| BXD04 | 0.0 | 0.269 |
| BXD05 | 0.0 | -0.235 |
| BXD06 | 0.0 | 0.199 |
| BXD07 | 0.0 | 0.107 |
| BXD08 | 0.0 | 0.103 |
| BXD09 | 0.0 | -0.245 |
| CAST | 0.0 | -0.402 |
| CCcont | 2.716 | -0.41 |
| DS01 | 0.0 | -0.648 |
| DS02 | 0.0 | -0.597 |
| DS04 | 0.37 | -0.533 |
| DS0c | 0.0 | -0.596 |
| GP01 | 0.0 | -0.271 |
| GP02 | 0.0 | -0.145 |
| GP0c | 0.0 | -0.357 |
| NOD | 0.0 | -0.617 |
| NZO | 0.0 | -0.548 |
| PWK | 0.0 | -0.539 |
| H37Rv_KO_CtpC | 0.0 | -0.446 |
| H37Rv_KO_CtpD | 0.445 | -0.348 |
| H37Rv_KO_Rv1272 | 0.0 | -0.387 |
| H37Rv_KO_SugABC | 0.189 | -0.272 |
| H37Rv_KO_MbtN | 0.103 | -0.283 |
| Trans05 | 0.131 | -0.359 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | 0.0 | 0.0 |
| Rapamycin | 0.0 | 0.0 |
| Tcell | 0.0 | 0.857 |
| GMCSF | 0.0 | 0.0 |
| IFNab | 0.0 | 0.0 |
| IFNg | 0.0 | 0.0 |
| IFNg_GMCSF1 | 0.0 | 0.434 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 1.273 | -0.528 |
| delta_Rv3594 | -1.597 | -1.597 |
| delta_Rv3717 | -0.143 | -1.691 |
| delta_Rv3811 | -1.423 | -2.561 |
| delta_Rv0954 | -2.762 | -1.737 |
| PonA1 | -3.142 | 0.19 |
| EccD1_KO | -0.595 | -1.013 |
| EspI_KO | -1.435 | -1.996 |
| PE35_KO | 1.085 | 0.601 |
| PPE68_KO | 0.0 | -0.566 |
| glycerol2 | 0.0 | -0.347 |
| lignocerate | 0.0 | -0.302 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | 0.0 | -0.347 |
| acetate | 0.0 | -0.13 |
| glucAc | 0.0 | -0.957 |
| Rv0950ko | -3.169 | -1.601 |
| Rv1096ko | -2.868 | -2.395 |
| Rv3684ko | -4.169 | -2.292 |
| delta_otsA_trehalose | 0.0 | 0.667 |