TnSeqCorr

Top 10 genes with highest correlation to Rv0130/htdZ:

update plotcorrelationlink to info on gene
Rv0760c/- (cc=0.4933) info on Rv0760c/-
Rv0188/- (cc=0.4651) info on Rv0188/-
Rv2775/- (cc=0.4627) info on Rv2775/-
Rv1662/pks8 (cc=0.4532) info on Rv1662/pks8
Rv0990c/- (cc=0.4354) info on Rv0990c/-
Rv3138/pflA (cc=0.4242) info on Rv3138/pflA
Rv0078/- (cc=0.4131) info on Rv0078/-
Rv1498c/- (cc=0.4113) info on Rv1498c/-
Rv2496c/bkdB (cc=0.4062) info on Rv2496c/bkdB
Rv3829c/- (cc=0.4047) info on Rv3829c/-

Correlation of Rv0130/htdZ with Rv3829c/-

Normalized LFCs for Rv0130/htdZ:
(description and provenance of datasets)
Rv0130/htdZRv3829c/-
Fe_supp_jason_reseq

-1.467

-0.511

low_pH_jason_reseq

-0.544

0.555

NO_jason_reseq

-0.055

-0.27

B6_jason_reseq

-0.626

-1.185

MHCII_jason_reseq

-0.694

-0.647

Isoniazid02

-2.466

-0.31

Rifampicin4

-1.73

-0.523

Ethambutol3

-1.065

-0.102

Meropenem3

-0.833

0.125

Vancomycin16

-2.157

-0.072

Rv2680_day32

-0.249

0.917

H37Rv_KO_MarP

0.838

0.27

hypoxia_3wks

-1.188

-0.419

hypoxia_6wks

-0.622

-0.737

glycerol

-0.907

0.336

cholesterol

-0.797

-0.012

AJ

-0.029

0.113

Bibs02

-3.696

-0.907

Bibs02c

-2.805

-0.161

BL6

0.616

0.639

BL6a

-0.353

0.288

BXD01

1.054

0.542

BXD010

1.661

0.608

BXD011

0.985

0.34

BXD03

-1.262

0.378

BXD04

-1.154

0.534

BXD05

3.157

-0.033

BXD06

0.274

0.398

BXD07

0.0

0.361

BXD08

0.016

0.725

BXD09

0.859

0.225

CAST

0.472

-0.39

CCcont

-0.643

0.446

DS01

0.228

-0.332

DS02

1.054

0.254

DS04

-0.465

-0.547

DS0c

-0.933

0.071

GP01

1.056

0.313

GP02

-0.829

0.762

GP0c

-1.135

-0.438

NOD

-0.176

0.643

NZO

1.532

-0.189

PWK

0.722

-0.729

H37Rv_KO_CtpC

1.05

0.282

H37Rv_KO_CtpD

-1.884

1.268

H37Rv_KO_Rv1272

1.221

0.713

H37Rv_KO_SugABC

-0.567

0.807

H37Rv_KO_MbtN

1.877

0.201

Trans05

1.241

0.255

macrophage_unactivated

1.597

0.47

IL1

1.326

0.605

Rapamycin

0.0

0.218

Tcell

0.831

0.362

GMCSF

-0.61

1.117

IFNab

0.0

0.726

IFNg

0.826

0.593

IFNg_GMCSF1

-0.434

0.097

Rv1432_day32

-1.033

0.387

Rv1565c_day32

0.0

0.441

secA2_input

-0.712

0.313

delta_Rv3594

-1.874

-0.381

delta_Rv3717

-1.116

-0.58

delta_Rv3811

-2.439

0.22

delta_Rv0954

-1.425

0.013

PonA1

-3.371

0.149

EccD1_KO

3.289

1.207

EspI_KO

-0.339

1.149

PE35_KO

2.78

1.254

PPE68_KO

3.52

1.318

glycerol2

-2.409

-0.441

lignocerate

-1.196

-0.106

oleate

1.544

-0.225

phosphatidylcholine

-1.325

-0.409

acetate

-0.062

-0.447

glucAc

-1.172

-0.338

Rv0950ko

-0.805

-0.347

Rv1096ko

1.224

0.205

Rv3684ko

1.421

-0.236

delta_otsA_trehalose

0.0

-0.033