TnSeqCorr

Top 10 genes with highest correlation to Rv0130/htdZ:

update plotcorrelationlink to info on gene
Rv0760c/- (cc=0.4933) info on Rv0760c/-
Rv0188/- (cc=0.4651) info on Rv0188/-
Rv2775/- (cc=0.4627) info on Rv2775/-
Rv1662/pks8 (cc=0.4532) info on Rv1662/pks8
Rv0990c/- (cc=0.4354) info on Rv0990c/-
Rv3138/pflA (cc=0.4242) info on Rv3138/pflA
Rv0078/- (cc=0.4131) info on Rv0078/-
Rv1498c/- (cc=0.4113) info on Rv1498c/-
Rv2496c/bkdB (cc=0.4062) info on Rv2496c/bkdB
Rv3829c/- (cc=0.4047) info on Rv3829c/-

Correlation of Rv0130/htdZ with Rv3138/pflA

Normalized LFCs for Rv0130/htdZ:
(description and provenance of datasets)
Rv0130/htdZRv3138/pflA
Fe_supp_jason_reseq

-1.467

-0.298

low_pH_jason_reseq

-0.544

0.089

NO_jason_reseq

-0.055

-0.06

B6_jason_reseq

-0.626

-0.658

MHCII_jason_reseq

-0.694

-0.094

Isoniazid02

-2.466

0.153

Rifampicin4

-1.73

-0.173

Ethambutol3

-1.065

0.358

Meropenem3

-0.833

-0.818

Vancomycin16

-2.157

-0.485

Rv2680_day32

-0.249

-0.696

H37Rv_KO_MarP

0.838

0.346

hypoxia_3wks

-1.188

-0.032

hypoxia_6wks

-0.622

-0.081

glycerol

-0.907

-0.575

cholesterol

-0.797

0.068

AJ

-0.029

0.425

Bibs02

-3.696

0.527

Bibs02c

-2.805

0.582

BL6

0.616

0.17

BL6a

-0.353

0.732

BXD01

1.054

0.703

BXD010

1.661

0.479

BXD011

0.985

2.15

BXD03

-1.262

0.39

BXD04

-1.154

0.702

BXD05

3.157

0.833

BXD06

0.274

0.587

BXD07

0.0

0.831

BXD08

0.016

0.054

BXD09

0.859

0.746

CAST

0.472

-0.132

CCcont

-0.643

0.454

DS01

0.228

0.0

DS02

1.054

0.269

DS04

-0.465

-0.571

DS0c

-0.933

0.36

GP01

1.056

0.456

GP02

-0.829

0.077

GP0c

-1.135

-0.103

NOD

-0.176

-0.212

NZO

1.532

0.678

PWK

0.722

0.772

H37Rv_KO_CtpC

1.05

-0.241

H37Rv_KO_CtpD

-1.884

-0.198

H37Rv_KO_Rv1272

1.221

0.362

H37Rv_KO_SugABC

-0.567

-0.155

H37Rv_KO_MbtN

1.877

-0.113

Trans05

1.241

0.469

macrophage_unactivated

1.597

1.275

IL1

1.326

0.736

Rapamycin

0.0

0.292

Tcell

0.831

0.489

GMCSF

-0.61

0.57

IFNab

0.0

0.133

IFNg

0.826

0.454

IFNg_GMCSF1

-0.434

0.877

Rv1432_day32

-1.033

0.159

Rv1565c_day32

0.0

0.224

secA2_input

-0.712

-0.366

delta_Rv3594

-1.874

-0.878

delta_Rv3717

-1.116

-0.943

delta_Rv3811

-2.439

-0.665

delta_Rv0954

-1.425

0.12

PonA1

-3.371

-0.459

EccD1_KO

3.289

0.98

EspI_KO

-0.339

0.268

PE35_KO

2.78

0.274

PPE68_KO

3.52

0.358

glycerol2

-2.409

0.156

lignocerate

-1.196

0.379

oleate

1.544

0.021

phosphatidylcholine

-1.325

0.328

acetate

-0.062

-0.286

glucAc

-1.172

-0.017

Rv0950ko

-0.805

0.28

Rv1096ko

1.224

0.13

Rv3684ko

1.421

0.616

delta_otsA_trehalose

0.0

0.181