Top 10 genes with highest correlation to Rv0130/htdZ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0760c/- | (cc=0.4933) | info on Rv0760c/- |
| Rv0188/- | (cc=0.4651) | info on Rv0188/- |
| Rv2775/- | (cc=0.4627) | info on Rv2775/- |
| Rv1662/pks8 | (cc=0.4532) | info on Rv1662/pks8 |
| Rv0990c/- | (cc=0.4354) | info on Rv0990c/- |
| Rv3138/pflA | (cc=0.4242) | info on Rv3138/pflA |
| Rv0078/- | (cc=0.4131) | info on Rv0078/- |
| Rv1498c/- | (cc=0.4113) | info on Rv1498c/- |
| Rv2496c/bkdB | (cc=0.4062) | info on Rv2496c/bkdB |
| Rv3829c/- | (cc=0.4047) | info on Rv3829c/- |
Correlation of Rv0130/htdZ with Rv0188/-
Normalized LFCs for Rv0130/htdZ:
(description and provenance of datasets)
| Rv0130/htdZ | Rv0188/- | |
| Fe_supp_jason_reseq | -1.467 | -0.766 |
| low_pH_jason_reseq | -0.544 | 0.268 |
| NO_jason_reseq | -0.055 | 0.801 |
| B6_jason_reseq | -0.626 | -0.538 |
| MHCII_jason_reseq | -0.694 | 0.058 |
| Isoniazid02 | -2.466 | -0.412 |
| Rifampicin4 | -1.73 | 0.211 |
| Ethambutol3 | -1.065 | -0.218 |
| Meropenem3 | -0.833 | 0.793 |
| Vancomycin16 | -2.157 | -0.167 |
| Rv2680_day32 | -0.249 | -0.618 |
| H37Rv_KO_MarP | 0.838 | 0.452 |
| hypoxia_3wks | -1.188 | -0.291 |
| hypoxia_6wks | -0.622 | -0.311 |
| glycerol | -0.907 | -1.26 |
| cholesterol | -0.797 | -1.501 |
| AJ | -0.029 | -0.548 |
| Bibs02 | -3.696 | -1.481 |
| Bibs02c | -2.805 | -0.862 |
| BL6 | 0.616 | 1.733 |
| BL6a | -0.353 | 0.862 |
| BXD01 | 1.054 | 1.395 |
| BXD010 | 1.661 | 1.117 |
| BXD011 | 0.985 | 0.854 |
| BXD03 | -1.262 | 0.881 |
| BXD04 | -1.154 | 1.39 |
| BXD05 | 3.157 | 1.424 |
| BXD06 | 0.274 | 1.469 |
| BXD07 | 0.0 | 1.263 |
| BXD08 | 0.016 | 2.603 |
| BXD09 | 0.859 | 1.275 |
| CAST | 0.472 | 0.257 |
| CCcont | -0.643 | 1.593 |
| DS01 | 0.228 | -0.263 |
| DS02 | 1.054 | -0.75 |
| DS04 | -0.465 | 0.045 |
| DS0c | -0.933 | -1.307 |
| GP01 | 1.056 | 1.934 |
| GP02 | -0.829 | -0.574 |
| GP0c | -1.135 | 0.225 |
| NOD | -0.176 | -0.107 |
| NZO | 1.532 | 0.285 |
| PWK | 0.722 | -0.27 |
| H37Rv_KO_CtpC | 1.05 | -0.078 |
| H37Rv_KO_CtpD | -1.884 | -0.994 |
| H37Rv_KO_Rv1272 | 1.221 | 0.828 |
| H37Rv_KO_SugABC | -0.567 | 0.735 |
| H37Rv_KO_MbtN | 1.877 | 1.059 |
| Trans05 | 1.241 | 1.637 |
| macrophage_unactivated | 1.597 | 0.739 |
| IL1 | 1.326 | -0.896 |
| Rapamycin | 0.0 | -0.724 |
| Tcell | 0.831 | -0.368 |
| GMCSF | -0.61 | 0.364 |
| IFNab | 0.0 | -0.054 |
| IFNg | 0.826 | -0.746 |
| IFNg_GMCSF1 | -0.434 | 0.195 |
| Rv1432_day32 | -1.033 | -0.026 |
| Rv1565c_day32 | 0.0 | -0.494 |
| secA2_input | -0.712 | -0.43 |
| delta_Rv3594 | -1.874 | -1.205 |
| delta_Rv3717 | -1.116 | -0.76 |
| delta_Rv3811 | -2.439 | -0.848 |
| delta_Rv0954 | -1.425 | -0.665 |
| PonA1 | -3.371 | -1.947 |
| EccD1_KO | 3.289 | 0.569 |
| EspI_KO | -0.339 | -0.394 |
| PE35_KO | 2.78 | -0.21 |
| PPE68_KO | 3.52 | 0.793 |
| glycerol2 | -2.409 | 0.879 |
| lignocerate | -1.196 | 0.693 |
| oleate | 1.544 | 0.549 |
| phosphatidylcholine | -1.325 | 0.704 |
| acetate | -0.062 | 0.411 |
| glucAc | -1.172 | -0.008 |
| Rv0950ko | -0.805 | 0.09 |
| Rv1096ko | 1.224 | 1.191 |
| Rv3684ko | 1.421 | 1.192 |
| delta_otsA_trehalose | 0.0 | -0.811 |