TnSeqCorr

Top 10 genes with highest correlation to Rv0130/htdZ:

update plotcorrelationlink to info on gene
Rv0760c/- (cc=0.4933) info on Rv0760c/-
Rv0188/- (cc=0.4651) info on Rv0188/-
Rv2775/- (cc=0.4627) info on Rv2775/-
Rv1662/pks8 (cc=0.4532) info on Rv1662/pks8
Rv0990c/- (cc=0.4354) info on Rv0990c/-
Rv3138/pflA (cc=0.4242) info on Rv3138/pflA
Rv0078/- (cc=0.4131) info on Rv0078/-
Rv1498c/- (cc=0.4113) info on Rv1498c/-
Rv2496c/bkdB (cc=0.4062) info on Rv2496c/bkdB
Rv3829c/- (cc=0.4047) info on Rv3829c/-

Correlation of Rv0130/htdZ with Rv0990c/-

Normalized LFCs for Rv0130/htdZ:
(description and provenance of datasets)
Rv0130/htdZRv0990c/-
Fe_supp_jason_reseq

-1.467

-1.389

low_pH_jason_reseq

-0.544

0.683

NO_jason_reseq

-0.055

-0.499

B6_jason_reseq

-0.626

0.178

MHCII_jason_reseq

-0.694

0.942

Isoniazid02

-2.466

-0.138

Rifampicin4

-1.73

-0.455

Ethambutol3

-1.065

0.315

Meropenem3

-0.833

0.359

Vancomycin16

-2.157

-0.066

Rv2680_day32

-0.249

-0.444

H37Rv_KO_MarP

0.838

-0.179

hypoxia_3wks

-1.188

-0.514

hypoxia_6wks

-0.622

-0.963

glycerol

-0.907

0.19

cholesterol

-0.797

-0.302

AJ

-0.029

0.459

Bibs02

-3.696

-0.261

Bibs02c

-2.805

-0.605

BL6

0.616

0.157

BL6a

-0.353

0.082

BXD01

1.054

-0.413

BXD010

1.661

0.199

BXD011

0.985

0.476

BXD03

-1.262

-0.204

BXD04

-1.154

-0.837

BXD05

3.157

-0.757

BXD06

0.274

-0.475

BXD07

0.0

-0.338

BXD08

0.016

-0.312

BXD09

0.859

-0.472

CAST

0.472

-0.582

CCcont

-0.643

-0.312

DS01

0.228

0.311

DS02

1.054

0.624

DS04

-0.465

0.514

DS0c

-0.933

0.679

GP01

1.056

0.16

GP02

-0.829

0.23

GP0c

-1.135

0.479

NOD

-0.176

0.225

NZO

1.532

1.087

PWK

0.722

0.014

H37Rv_KO_CtpC

1.05

0.244

H37Rv_KO_CtpD

-1.884

0.22

H37Rv_KO_Rv1272

1.221

-0.271

H37Rv_KO_SugABC

-0.567

0.403

H37Rv_KO_MbtN

1.877

0.579

Trans05

1.241

0.947

macrophage_unactivated

1.597

0.06

IL1

1.326

0.762

Rapamycin

0.0

0.737

Tcell

0.831

-0.714

GMCSF

-0.61

-0.293

IFNab

0.0

0.284

IFNg

0.826

0.102

IFNg_GMCSF1

-0.434

-0.06

Rv1432_day32

-1.033

-0.227

Rv1565c_day32

0.0

-0.066

secA2_input

-0.712

-0.285

delta_Rv3594

-1.874

-1.386

delta_Rv3717

-1.116

-1.475

delta_Rv3811

-2.439

-2.195

delta_Rv0954

-1.425

-0.282

PonA1

-3.371

-0.136

EccD1_KO

3.289

1.901

EspI_KO

-0.339

2.935

PE35_KO

2.78

0.974

PPE68_KO

3.52

1.312

glycerol2

-2.409

-1.819

lignocerate

-1.196

-0.437

oleate

1.544

-0.486

phosphatidylcholine

-1.325

-0.916

acetate

-0.062

0.06

glucAc

-1.172

-0.716

Rv0950ko

-0.805

-0.223

Rv1096ko

1.224

-0.362

Rv3684ko

1.421

0.452

delta_otsA_trehalose

0.0

-0.111