TnSeqCorr

Top 10 genes with highest correlation to Rv0130/htdZ:

update plotcorrelationlink to info on gene
Rv0760c/- (cc=0.4933) info on Rv0760c/-
Rv0188/- (cc=0.4651) info on Rv0188/-
Rv2775/- (cc=0.4627) info on Rv2775/-
Rv1662/pks8 (cc=0.4532) info on Rv1662/pks8
Rv0990c/- (cc=0.4354) info on Rv0990c/-
Rv3138/pflA (cc=0.4242) info on Rv3138/pflA
Rv0078/- (cc=0.4131) info on Rv0078/-
Rv1498c/- (cc=0.4113) info on Rv1498c/-
Rv2496c/bkdB (cc=0.4062) info on Rv2496c/bkdB
Rv3829c/- (cc=0.4047) info on Rv3829c/-

Correlation of Rv0130/htdZ with Rv0078/-

Normalized LFCs for Rv0130/htdZ:
(description and provenance of datasets)
Rv0130/htdZRv0078/-
Fe_supp_jason_reseq

-1.467

-0.23

low_pH_jason_reseq

-0.544

-0.144

NO_jason_reseq

-0.055

0.903

B6_jason_reseq

-0.626

-1.237

MHCII_jason_reseq

-0.694

-0.301

Isoniazid02

-2.466

-1.112

Rifampicin4

-1.73

-0.899

Ethambutol3

-1.065

-0.074

Meropenem3

-0.833

-0.915

Vancomycin16

-2.157

-0.565

Rv2680_day32

-0.249

0.235

H37Rv_KO_MarP

0.838

0.093

hypoxia_3wks

-1.188

1.284

hypoxia_6wks

-0.622

0.288

glycerol

-0.907

-0.521

cholesterol

-0.797

-0.789

AJ

-0.029

-0.239

Bibs02

-3.696

-0.397

Bibs02c

-2.805

-0.54

BL6

0.616

-1.52

BL6a

-0.353

0.0

BXD01

1.054

-0.392

BXD010

1.661

-0.564

BXD011

0.985

-0.086

BXD03

-1.262

-0.98

BXD04

-1.154

-0.372

BXD05

3.157

0.71

BXD06

0.274

0.24

BXD07

0.0

0.0

BXD08

0.016

-0.521

BXD09

0.859

0.131

CAST

0.472

-0.692

CCcont

-0.643

-1.082

DS01

0.228

0.221

DS02

1.054

1.467

DS04

-0.465

-1.405

DS0c

-0.933

0.0

GP01

1.056

0.062

GP02

-0.829

-0.929

GP0c

-1.135

-0.231

NOD

-0.176

1.048

NZO

1.532

-0.98

PWK

0.722

-0.065

H37Rv_KO_CtpC

1.05

0.292

H37Rv_KO_CtpD

-1.884

2.097

H37Rv_KO_Rv1272

1.221

0.998

H37Rv_KO_SugABC

-0.567

-0.067

H37Rv_KO_MbtN

1.877

0.677

Trans05

1.241

0.161

macrophage_unactivated

1.597

1.042

IL1

1.326

0.463

Rapamycin

0.0

0.126

Tcell

0.831

1.075

GMCSF

-0.61

-1.133

IFNab

0.0

-0.529

IFNg

0.826

0.794

IFNg_GMCSF1

-0.434

0.606

Rv1432_day32

-1.033

0.454

Rv1565c_day32

0.0

-0.455

secA2_input

-0.712

-1.597

delta_Rv3594

-1.874

-1.71

delta_Rv3717

-1.116

-1.047

delta_Rv3811

-2.439

-0.846

delta_Rv0954

-1.425

-0.447

PonA1

-3.371

-1.554

EccD1_KO

3.289

-0.316

EspI_KO

-0.339

-0.493

PE35_KO

2.78

2.053

PPE68_KO

3.52

1.401

glycerol2

-2.409

-3.723

lignocerate

-1.196

-3.328

oleate

1.544

-2.786

phosphatidylcholine

-1.325

-2.598

acetate

-0.062

-1.386

glucAc

-1.172

-4.385

Rv0950ko

-0.805

1.025

Rv1096ko

1.224

0.917

Rv3684ko

1.421

0.491

delta_otsA_trehalose

0.0

0.77