TnSeqCorr

Top 10 genes with highest correlation to Rv0130/htdZ:

update plotcorrelationlink to info on gene
Rv0760c/- (cc=0.4933) info on Rv0760c/-
Rv0188/- (cc=0.4651) info on Rv0188/-
Rv2775/- (cc=0.4627) info on Rv2775/-
Rv1662/pks8 (cc=0.4532) info on Rv1662/pks8
Rv0990c/- (cc=0.4354) info on Rv0990c/-
Rv3138/pflA (cc=0.4242) info on Rv3138/pflA
Rv0078/- (cc=0.4131) info on Rv0078/-
Rv1498c/- (cc=0.4113) info on Rv1498c/-
Rv2496c/bkdB (cc=0.4062) info on Rv2496c/bkdB
Rv3829c/- (cc=0.4047) info on Rv3829c/-

Correlation of Rv0130/htdZ with Rv2775/-

Normalized LFCs for Rv0130/htdZ:
(description and provenance of datasets)
Rv0130/htdZRv2775/-
Fe_supp_jason_reseq

-1.467

0.466

low_pH_jason_reseq

-0.544

-0.037

NO_jason_reseq

-0.055

-0.977

B6_jason_reseq

-0.626

0.469

MHCII_jason_reseq

-0.694

-0.364

Isoniazid02

-2.466

-0.389

Rifampicin4

-1.73

-0.038

Ethambutol3

-1.065

-0.276

Meropenem3

-0.833

-1.548

Vancomycin16

-2.157

-0.127

Rv2680_day32

-0.249

-0.205

H37Rv_KO_MarP

0.838

-0.666

hypoxia_3wks

-1.188

-0.817

hypoxia_6wks

-0.622

0.058

glycerol

-0.907

-1.814

cholesterol

-0.797

-1.544

AJ

-0.029

0.474

Bibs02

-3.696

-1.113

Bibs02c

-2.805

-0.1

BL6

0.616

0.246

BL6a

-0.353

0.595

BXD01

1.054

0.083

BXD010

1.661

1.009

BXD011

0.985

0.952

BXD03

-1.262

0.569

BXD04

-1.154

0.432

BXD05

3.157

2.161

BXD06

0.274

1.25

BXD07

0.0

0.675

BXD08

0.016

0.499

BXD09

0.859

0.951

CAST

0.472

0.592

CCcont

-0.643

0.59

DS01

0.228

0.994

DS02

1.054

-0.378

DS04

-0.465

0.037

DS0c

-0.933

-0.192

GP01

1.056

1.913

GP02

-0.829

0.55

GP0c

-1.135

1.296

NOD

-0.176

1.394

NZO

1.532

0.162

PWK

0.722

1.047

H37Rv_KO_CtpC

1.05

0.599

H37Rv_KO_CtpD

-1.884

1.142

H37Rv_KO_Rv1272

1.221

1.787

H37Rv_KO_SugABC

-0.567

1.287

H37Rv_KO_MbtN

1.877

0.538

Trans05

1.241

1.467

macrophage_unactivated

1.597

0.524

IL1

1.326

-0.35

Rapamycin

0.0

0.964

Tcell

0.831

-0.775

GMCSF

-0.61

0.525

IFNab

0.0

0.747

IFNg

0.826

0.083

IFNg_GMCSF1

-0.434

0.019

Rv1432_day32

-1.033

0.113

Rv1565c_day32

0.0

0.199

secA2_input

-0.712

0.172

delta_Rv3594

-1.874

-0.812

delta_Rv3717

-1.116

-1.117

delta_Rv3811

-2.439

-1.056

delta_Rv0954

-1.425

-1.181

PonA1

-3.371

-2.209

EccD1_KO

3.289

0.506

EspI_KO

-0.339

1.269

PE35_KO

2.78

1.502

PPE68_KO

3.52

1.574

glycerol2

-2.409

0.0

lignocerate

-1.196

0.935

oleate

1.544

-1.208

phosphatidylcholine

-1.325

0.629

acetate

-0.062

0.469

glucAc

-1.172

0.563

Rv0950ko

-0.805

0.389

Rv1096ko

1.224

0.178

Rv3684ko

1.421

-0.098

delta_otsA_trehalose

0.0

-0.085