Top 10 genes with highest correlation to Rv3758c/proV:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1087/PE_PGRS21 | (cc=0.4767) | info on Rv1087/PE_PGRS21 |
| Rv1044/- | (cc=0.4633) | info on Rv1044/- |
| Rv2841c/nusA | (cc=0.4231) | info on Rv2841c/nusA |
| Rv2873/mpt83 | (cc=0.4213) | info on Rv2873/mpt83 |
| Rv1948c/- | (cc=0.409) | info on Rv1948c/- |
| Rv2850c/- | (cc=0.4029) | info on Rv2850c/- |
| Rv3417c/groEL1 | (cc=0.3974) | info on Rv3417c/groEL1 |
| Rv1091/PE_PGRS22 | (cc=0.3933) | info on Rv1091/PE_PGRS22 |
| Rv1676/- | (cc=0.3922) | info on Rv1676/- |
| Rv1597/- | (cc=0.386) | info on Rv1597/- |
Correlation of Rv3758c/proV with Rv1044/-
Normalized LFCs for Rv3758c/proV:
(description and provenance of datasets)
| Rv3758c/proV | Rv1044/- | |
| Fe_supp_jason_reseq | 0.096 | 1.163 |
| low_pH_jason_reseq | -0.393 | -0.768 |
| NO_jason_reseq | 0.312 | -0.116 |
| B6_jason_reseq | 0.084 | -1.759 |
| MHCII_jason_reseq | -0.766 | 0.498 |
| Isoniazid02 | 0.023 | 0.0 |
| Rifampicin4 | -0.376 | 0.558 |
| Ethambutol3 | 0.117 | 0.066 |
| Meropenem3 | 0.188 | 0.065 |
| Vancomycin16 | 1.263 | 0.796 |
| Rv2680_day32 | 0.617 | 0.0 |
| H37Rv_KO_MarP | 0.711 | -0.272 |
| hypoxia_3wks | 0.056 | 0.0 |
| hypoxia_6wks | 0.198 | 0.274 |
| glycerol | 0.671 | -1.583 |
| cholesterol | 0.178 | -0.492 |
| AJ | 0.108 | -0.983 |
| Bibs02 | 0.544 | 1.403 |
| Bibs02c | 0.677 | -0.797 |
| BL6 | 0.634 | -0.53 |
| BL6a | -0.023 | -0.927 |
| BXD01 | 0.241 | -0.343 |
| BXD010 | 0.502 | -1.586 |
| BXD011 | -0.178 | -0.782 |
| BXD03 | -0.364 | -0.762 |
| BXD04 | -0.867 | -0.42 |
| BXD05 | 0.047 | 0.283 |
| BXD06 | -0.065 | -0.892 |
| BXD07 | 0.048 | -1.085 |
| BXD08 | 0.542 | -1.127 |
| BXD09 | -0.235 | -0.596 |
| CAST | -0.14 | -1.185 |
| CCcont | 0.391 | -0.393 |
| DS01 | 0.216 | -1.215 |
| DS02 | 0.444 | -0.922 |
| DS04 | 0.76 | 0.056 |
| DS0c | 0.919 | 0.556 |
| GP01 | 1.102 | -0.462 |
| GP02 | -0.083 | -0.885 |
| GP0c | 0.541 | 0.391 |
| NOD | -0.605 | -1.051 |
| NZO | -0.631 | -1.026 |
| PWK | 0.283 | 0.364 |
| H37Rv_KO_CtpC | -0.019 | -1.486 |
| H37Rv_KO_CtpD | 1.574 | 1.889 |
| H37Rv_KO_Rv1272 | 0.553 | -1.29 |
| H37Rv_KO_SugABC | 0.111 | -0.224 |
| H37Rv_KO_MbtN | 0.942 | 1.486 |
| Trans05 | 0.228 | 0.038 |
| macrophage_unactivated | -0.098 | 0.398 |
| IL1 | -0.967 | -2.251 |
| Rapamycin | -0.344 | -2.001 |
| Tcell | -1.062 | -3.05 |
| GMCSF | -0.082 | -2.64 |
| IFNab | -0.596 | -1.817 |
| IFNg | -0.433 | -1.743 |
| IFNg_GMCSF1 | -0.198 | -2.564 |
| Rv1432_day32 | -0.679 | -0.748 |
| Rv1565c_day32 | -0.122 | -0.218 |
| secA2_input | 0.26 | 0.398 |
| delta_Rv3594 | 0.407 | 0.0 |
| delta_Rv3717 | 0.079 | -0.308 |
| delta_Rv3811 | 0.271 | 0.532 |
| delta_Rv0954 | -0.152 | 1.009 |
| PonA1 | 0.055 | 0.413 |
| EccD1_KO | 0.069 | -0.132 |
| EspI_KO | -0.933 | -0.348 |
| PE35_KO | 0.061 | -0.481 |
| PPE68_KO | -0.205 | -0.39 |
| glycerol2 | 0.212 | -0.27 |
| lignocerate | 0.133 | -0.113 |
| oleate | 0.14 | -0.274 |
| phosphatidylcholine | -0.015 | -0.42 |
| acetate | 0.268 | 0.283 |
| glucAc | -0.024 | 0.333 |
| Rv0950ko | 0.199 | 0.528 |
| Rv1096ko | 0.576 | 0.271 |
| Rv3684ko | 0.046 | 0.707 |
| delta_otsA_trehalose | 0.803 | 0.599 |