Top 10 genes with highest correlation to Rv3746c/PE34:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0595c/vapC4 | (cc=0.5257) | info on Rv0595c/vapC4 |
| Rv3553/- | (cc=0.5166) | info on Rv3553/- |
| Rv1494/mazE4 | (cc=0.5118) | info on Rv1494/mazE4 |
| Rv3544c/fadE28 | (cc=0.5024) | info on Rv3544c/fadE28 |
| Rv3551/- | (cc=0.4784) | info on Rv3551/- |
| Rv1065/- | (cc=0.4781) | info on Rv1065/- |
| Rv3869/eccB1 | (cc=0.4711) | info on Rv3869/eccB1 |
| Rv3873/PPE68 | (cc=0.4681) | info on Rv3873/PPE68 |
| Rv3540c/ltp2 | (cc=0.4647) | info on Rv3540c/ltp2 |
| Rv3563/fadE32 | (cc=0.4636) | info on Rv3563/fadE32 |
Correlation of Rv3746c/PE34 with Rv3553/-
Normalized LFCs for Rv3746c/PE34:
(description and provenance of datasets)
| Rv3746c/PE34 | Rv3553/- | |
| Fe_supp_jason_reseq | -0.584 | -0.346 |
| low_pH_jason_reseq | -1.134 | -0.798 |
| NO_jason_reseq | -0.583 | -1.685 |
| B6_jason_reseq | -0.486 | -2.718 |
| MHCII_jason_reseq | -0.362 | -2.764 |
| Isoniazid02 | 0.633 | 0.141 |
| Rifampicin4 | -0.699 | 0.054 |
| Ethambutol3 | 0.73 | -0.113 |
| Meropenem3 | -0.086 | 1.961 |
| Vancomycin16 | -0.334 | 0.08 |
| Rv2680_day32 | 3.21 | -0.074 |
| H37Rv_KO_MarP | 0.02 | 0.487 |
| hypoxia_3wks | -0.183 | -0.845 |
| hypoxia_6wks | 0.336 | 0.311 |
| glycerol | -0.56 | -0.36 |
| cholesterol | -0.564 | -3.515 |
| AJ | -0.459 | -2.393 |
| Bibs02 | -3.625 | -4.437 |
| Bibs02c | -1.285 | -3.674 |
| BL6 | -0.98 | -1.398 |
| BL6a | -0.673 | -2.752 |
| BXD01 | -1.429 | -1.241 |
| BXD010 | -0.149 | -1.394 |
| BXD011 | -0.496 | -0.52 |
| BXD03 | -0.995 | 0.554 |
| BXD04 | -1.258 | -1.209 |
| BXD05 | -1.141 | -0.145 |
| BXD06 | -0.936 | -1.453 |
| BXD07 | -0.726 | -0.464 |
| BXD08 | -1.332 | -0.937 |
| BXD09 | -1.173 | -1.953 |
| CAST | -2.172 | -3.482 |
| CCcont | -1.227 | 0.355 |
| DS01 | -1.128 | -3.472 |
| DS02 | -1.405 | -4.682 |
| DS04 | -1.802 | -3.407 |
| DS0c | -1.425 | -5.264 |
| GP01 | 0.927 | -0.565 |
| GP02 | -1.4 | -1.861 |
| GP0c | 0.43 | 0.139 |
| NOD | -0.971 | -2.511 |
| NZO | -0.48 | 0.1 |
| PWK | -0.011 | -1.77 |
| H37Rv_KO_CtpC | -1.729 | -3.144 |
| H37Rv_KO_CtpD | -2.168 | -1.494 |
| H37Rv_KO_Rv1272 | -1.775 | -0.089 |
| H37Rv_KO_SugABC | 0.029 | -0.01 |
| H37Rv_KO_MbtN | -1.401 | -0.159 |
| Trans05 | 0.052 | 0.536 |
| macrophage_unactivated | -0.492 | 0.0 |
| IL1 | -2.144 | 0.317 |
| Rapamycin | 0.252 | 0.485 |
| Tcell | -1.075 | -2.225 |
| GMCSF | 1.265 | 0.694 |
| IFNab | -0.435 | 1.246 |
| IFNg | -0.262 | 0.203 |
| IFNg_GMCSF1 | -0.415 | 0.17 |
| Rv1432_day32 | -1.147 | -0.926 |
| Rv1565c_day32 | -1.104 | -1.589 |
| secA2_input | 1.461 | -0.471 |
| delta_Rv3594 | 0.541 | 0.318 |
| delta_Rv3717 | -0.088 | 0.539 |
| delta_Rv3811 | 0.18 | 1.096 |
| delta_Rv0954 | 1.811 | 0.451 |
| PonA1 | 0.898 | -0.04 |
| EccD1_KO | 0.474 | 0.214 |
| EspI_KO | -0.647 | -0.57 |
| PE35_KO | -0.89 | 0.0 |
| PPE68_KO | -0.976 | -0.262 |
| glycerol2 | -0.255 | -0.238 |
| lignocerate | -0.418 | 0.817 |
| oleate | 0.135 | -2.912 |
| phosphatidylcholine | -0.105 | -0.038 |
| acetate | -0.992 | 0.517 |
| glucAc | -0.064 | 0.827 |
| Rv0950ko | 0.896 | 0.525 |
| Rv1096ko | 0.73 | 1.629 |
| Rv3684ko | 0.524 | 2.024 |
| delta_otsA_trehalose | -0.092 | -0.603 |