Top 10 genes with highest correlation to Rv3746c/PE34:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0595c/vapC4 | (cc=0.5257) | info on Rv0595c/vapC4 |
| Rv3553/- | (cc=0.5166) | info on Rv3553/- |
| Rv1494/mazE4 | (cc=0.5118) | info on Rv1494/mazE4 |
| Rv3544c/fadE28 | (cc=0.5024) | info on Rv3544c/fadE28 |
| Rv3551/- | (cc=0.4784) | info on Rv3551/- |
| Rv1065/- | (cc=0.4781) | info on Rv1065/- |
| Rv3869/eccB1 | (cc=0.4711) | info on Rv3869/eccB1 |
| Rv3873/PPE68 | (cc=0.4681) | info on Rv3873/PPE68 |
| Rv3540c/ltp2 | (cc=0.4647) | info on Rv3540c/ltp2 |
| Rv3563/fadE32 | (cc=0.4636) | info on Rv3563/fadE32 |
Correlation of Rv3746c/PE34 with Rv3540c/ltp2
Normalized LFCs for Rv3746c/PE34:
(description and provenance of datasets)
| Rv3746c/PE34 | Rv3540c/ltp2 | |
| Fe_supp_jason_reseq | -0.584 | -0.218 |
| low_pH_jason_reseq | -1.134 | 0.979 |
| NO_jason_reseq | -0.583 | -0.176 |
| B6_jason_reseq | -0.486 | -2.219 |
| MHCII_jason_reseq | -0.362 | -1.719 |
| Isoniazid02 | 0.633 | 2.103 |
| Rifampicin4 | -0.699 | -0.171 |
| Ethambutol3 | 0.73 | 2.831 |
| Meropenem3 | -0.086 | -0.236 |
| Vancomycin16 | -0.334 | -0.618 |
| Rv2680_day32 | 3.21 | 0.0 |
| H37Rv_KO_MarP | 0.02 | -0.169 |
| hypoxia_3wks | -0.183 | -0.132 |
| hypoxia_6wks | 0.336 | -0.069 |
| glycerol | -0.56 | 1.065 |
| cholesterol | -0.564 | -1.761 |
| AJ | -0.459 | -2.82 |
| Bibs02 | -3.625 | -2.223 |
| Bibs02c | -1.285 | -1.97 |
| BL6 | -0.98 | -0.752 |
| BL6a | -0.673 | -2.03 |
| BXD01 | -1.429 | -1.227 |
| BXD010 | -0.149 | -1.107 |
| BXD011 | -0.496 | -0.042 |
| BXD03 | -0.995 | 0.417 |
| BXD04 | -1.258 | -1.38 |
| BXD05 | -1.141 | -1.38 |
| BXD06 | -0.936 | -1.623 |
| BXD07 | -0.726 | -1.197 |
| BXD08 | -1.332 | -1.363 |
| BXD09 | -1.173 | -1.44 |
| CAST | -2.172 | -2.571 |
| CCcont | -1.227 | 0.757 |
| DS01 | -1.128 | -2.871 |
| DS02 | -1.405 | -2.644 |
| DS04 | -1.802 | -1.989 |
| DS0c | -1.425 | -2.637 |
| GP01 | 0.927 | -1.102 |
| GP02 | -1.4 | -0.929 |
| GP0c | 0.43 | 0.785 |
| NOD | -0.971 | -1.351 |
| NZO | -0.48 | -2.425 |
| PWK | -0.011 | -2.384 |
| H37Rv_KO_CtpC | -1.729 | -1.813 |
| H37Rv_KO_CtpD | -2.168 | -1.095 |
| H37Rv_KO_Rv1272 | -1.775 | -1.022 |
| H37Rv_KO_SugABC | 0.029 | -1.106 |
| H37Rv_KO_MbtN | -1.401 | -1.056 |
| Trans05 | 0.052 | -0.512 |
| macrophage_unactivated | -0.492 | -0.83 |
| IL1 | -2.144 | -0.451 |
| Rapamycin | 0.252 | 0.0 |
| Tcell | -1.075 | -3.584 |
| GMCSF | 1.265 | 0.246 |
| IFNab | -0.435 | 2.316 |
| IFNg | -0.262 | 1.013 |
| IFNg_GMCSF1 | -0.415 | -1.405 |
| Rv1432_day32 | -1.147 | -0.18 |
| Rv1565c_day32 | -1.104 | -0.766 |
| secA2_input | 1.461 | 1.249 |
| delta_Rv3594 | 0.541 | -0.225 |
| delta_Rv3717 | -0.088 | 0.37 |
| delta_Rv3811 | 0.18 | 0.437 |
| delta_Rv0954 | 1.811 | 0.652 |
| PonA1 | 0.898 | 0.693 |
| EccD1_KO | 0.474 | 0.635 |
| EspI_KO | -0.647 | 0.918 |
| PE35_KO | -0.89 | 0.292 |
| PPE68_KO | -0.976 | 0.32 |
| glycerol2 | -0.255 | 1.292 |
| lignocerate | -0.418 | 1.628 |
| oleate | 0.135 | -1.117 |
| phosphatidylcholine | -0.105 | 0.854 |
| acetate | -0.992 | 2.068 |
| glucAc | -0.064 | 2.286 |
| Rv0950ko | 0.896 | 0.093 |
| Rv1096ko | 0.73 | 1.3 |
| Rv3684ko | 0.524 | 0.845 |
| delta_otsA_trehalose | -0.092 | 0.327 |