Top 10 genes with highest correlation to Rv3746c/PE34:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0595c/vapC4 | (cc=0.5257) | info on Rv0595c/vapC4 |
| Rv3553/- | (cc=0.5166) | info on Rv3553/- |
| Rv1494/mazE4 | (cc=0.5118) | info on Rv1494/mazE4 |
| Rv3544c/fadE28 | (cc=0.5024) | info on Rv3544c/fadE28 |
| Rv3551/- | (cc=0.4784) | info on Rv3551/- |
| Rv1065/- | (cc=0.4781) | info on Rv1065/- |
| Rv3869/eccB1 | (cc=0.4711) | info on Rv3869/eccB1 |
| Rv3873/PPE68 | (cc=0.4681) | info on Rv3873/PPE68 |
| Rv3540c/ltp2 | (cc=0.4647) | info on Rv3540c/ltp2 |
| Rv3563/fadE32 | (cc=0.4636) | info on Rv3563/fadE32 |
Correlation of Rv3746c/PE34 with Rv1065/-
Normalized LFCs for Rv3746c/PE34:
(description and provenance of datasets)
| Rv3746c/PE34 | Rv1065/- | |
| Fe_supp_jason_reseq | -0.584 | -0.085 |
| low_pH_jason_reseq | -1.134 | -0.773 |
| NO_jason_reseq | -0.583 | -0.16 |
| B6_jason_reseq | -0.486 | -3.079 |
| MHCII_jason_reseq | -0.362 | -2.083 |
| Isoniazid02 | 0.633 | -0.007 |
| Rifampicin4 | -0.699 | 0.014 |
| Ethambutol3 | 0.73 | 1.204 |
| Meropenem3 | -0.086 | 0.272 |
| Vancomycin16 | -0.334 | -0.167 |
| Rv2680_day32 | 3.21 | -0.561 |
| H37Rv_KO_MarP | 0.02 | 0.113 |
| hypoxia_3wks | -0.183 | 0.191 |
| hypoxia_6wks | 0.336 | -0.228 |
| glycerol | -0.56 | 0.268 |
| cholesterol | -0.564 | -1.007 |
| AJ | -0.459 | -1.382 |
| Bibs02 | -3.625 | -2.387 |
| Bibs02c | -1.285 | -2.102 |
| BL6 | -0.98 | -0.413 |
| BL6a | -0.673 | -1.652 |
| BXD01 | -1.429 | -1.005 |
| BXD010 | -0.149 | -1.373 |
| BXD011 | -0.496 | -0.676 |
| BXD03 | -0.995 | -0.576 |
| BXD04 | -1.258 | -0.736 |
| BXD05 | -1.141 | -0.852 |
| BXD06 | -0.936 | -1.101 |
| BXD07 | -0.726 | -1.261 |
| BXD08 | -1.332 | -1.365 |
| BXD09 | -1.173 | -1.239 |
| CAST | -2.172 | -2.364 |
| CCcont | -1.227 | -0.674 |
| DS01 | -1.128 | -3.374 |
| DS02 | -1.405 | -1.344 |
| DS04 | -1.802 | -3.485 |
| DS0c | -1.425 | -2.863 |
| GP01 | 0.927 | 0.052 |
| GP02 | -1.4 | 0.431 |
| GP0c | 0.43 | 0.084 |
| NOD | -0.971 | -2.184 |
| NZO | -0.48 | -0.825 |
| PWK | -0.011 | -1.272 |
| H37Rv_KO_CtpC | -1.729 | -0.967 |
| H37Rv_KO_CtpD | -2.168 | -0.999 |
| H37Rv_KO_Rv1272 | -1.775 | -0.61 |
| H37Rv_KO_SugABC | 0.029 | -0.705 |
| H37Rv_KO_MbtN | -1.401 | -0.452 |
| Trans05 | 0.052 | -0.416 |
| macrophage_unactivated | -0.492 | -0.533 |
| IL1 | -2.144 | -0.786 |
| Rapamycin | 0.252 | -0.055 |
| Tcell | -1.075 | -0.485 |
| GMCSF | 1.265 | 0.591 |
| IFNab | -0.435 | -0.354 |
| IFNg | -0.262 | -0.69 |
| IFNg_GMCSF1 | -0.415 | -0.386 |
| Rv1432_day32 | -1.147 | -1.091 |
| Rv1565c_day32 | -1.104 | -0.834 |
| secA2_input | 1.461 | 1.032 |
| delta_Rv3594 | 0.541 | -1.017 |
| delta_Rv3717 | -0.088 | -0.296 |
| delta_Rv3811 | 0.18 | -0.219 |
| delta_Rv0954 | 1.811 | -1.353 |
| PonA1 | 0.898 | -0.3 |
| EccD1_KO | 0.474 | -0.25 |
| EspI_KO | -0.647 | 0.043 |
| PE35_KO | -0.89 | -0.292 |
| PPE68_KO | -0.976 | -0.144 |
| glycerol2 | -0.255 | -0.149 |
| lignocerate | -0.418 | -0.032 |
| oleate | 0.135 | 0.128 |
| phosphatidylcholine | -0.105 | 0.455 |
| acetate | -0.992 | 0.0 |
| glucAc | -0.064 | -0.187 |
| Rv0950ko | 0.896 | -0.087 |
| Rv1096ko | 0.73 | 0.169 |
| Rv3684ko | 0.524 | 0.069 |
| delta_otsA_trehalose | -0.092 | -0.524 |