Top 10 genes with highest correlation to Rv3746c/PE34:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0595c/vapC4 | (cc=0.5257) | info on Rv0595c/vapC4 |
| Rv3553/- | (cc=0.5166) | info on Rv3553/- |
| Rv1494/mazE4 | (cc=0.5118) | info on Rv1494/mazE4 |
| Rv3544c/fadE28 | (cc=0.5024) | info on Rv3544c/fadE28 |
| Rv3551/- | (cc=0.4784) | info on Rv3551/- |
| Rv1065/- | (cc=0.4781) | info on Rv1065/- |
| Rv3869/eccB1 | (cc=0.4711) | info on Rv3869/eccB1 |
| Rv3873/PPE68 | (cc=0.4681) | info on Rv3873/PPE68 |
| Rv3540c/ltp2 | (cc=0.4647) | info on Rv3540c/ltp2 |
| Rv3563/fadE32 | (cc=0.4636) | info on Rv3563/fadE32 |
Correlation of Rv3746c/PE34 with Rv0595c/vapC4
Normalized LFCs for Rv3746c/PE34:
(description and provenance of datasets)
| Rv3746c/PE34 | Rv0595c/vapC4 | |
| Fe_supp_jason_reseq | -0.584 | 0.952 |
| low_pH_jason_reseq | -1.134 | 0.918 |
| NO_jason_reseq | -0.583 | 0.522 |
| B6_jason_reseq | -0.486 | 1.072 |
| MHCII_jason_reseq | -0.362 | -0.694 |
| Isoniazid02 | 0.633 | 0.073 |
| Rifampicin4 | -0.699 | 0.417 |
| Ethambutol3 | 0.73 | 0.579 |
| Meropenem3 | -0.086 | 0.57 |
| Vancomycin16 | -0.334 | 0.645 |
| Rv2680_day32 | 3.21 | 1.429 |
| H37Rv_KO_MarP | 0.02 | 0.415 |
| hypoxia_3wks | -0.183 | -0.299 |
| hypoxia_6wks | 0.336 | -0.319 |
| glycerol | -0.56 | -0.091 |
| cholesterol | -0.564 | -0.049 |
| AJ | -0.459 | 0.114 |
| Bibs02 | -3.625 | -0.607 |
| Bibs02c | -1.285 | -0.834 |
| BL6 | -0.98 | -1.475 |
| BL6a | -0.673 | -2.101 |
| BXD01 | -1.429 | -2.684 |
| BXD010 | -0.149 | -0.361 |
| BXD011 | -0.496 | -1.833 |
| BXD03 | -0.995 | -1.16 |
| BXD04 | -1.258 | -1.763 |
| BXD05 | -1.141 | -1.799 |
| BXD06 | -0.936 | -2.013 |
| BXD07 | -0.726 | -1.722 |
| BXD08 | -1.332 | -1.214 |
| BXD09 | -1.173 | -1.599 |
| CAST | -2.172 | -0.023 |
| CCcont | -1.227 | -1.464 |
| DS01 | -1.128 | -0.157 |
| DS02 | -1.405 | -0.307 |
| DS04 | -1.802 | -1.62 |
| DS0c | -1.425 | -1.315 |
| GP01 | 0.927 | 0.821 |
| GP02 | -1.4 | -0.134 |
| GP0c | 0.43 | 0.056 |
| NOD | -0.971 | -0.343 |
| NZO | -0.48 | -0.376 |
| PWK | -0.011 | -0.277 |
| H37Rv_KO_CtpC | -1.729 | -1.097 |
| H37Rv_KO_CtpD | -2.168 | 0.059 |
| H37Rv_KO_Rv1272 | -1.775 | -0.872 |
| H37Rv_KO_SugABC | 0.029 | 0.347 |
| H37Rv_KO_MbtN | -1.401 | -1.511 |
| Trans05 | 0.052 | 0.223 |
| macrophage_unactivated | -0.492 | -0.467 |
| IL1 | -2.144 | -1.486 |
| Rapamycin | 0.252 | -0.034 |
| Tcell | -1.075 | -0.036 |
| GMCSF | 1.265 | 0.277 |
| IFNab | -0.435 | -0.203 |
| IFNg | -0.262 | -0.949 |
| IFNg_GMCSF1 | -0.415 | 0.0 |
| Rv1432_day32 | -1.147 | -0.838 |
| Rv1565c_day32 | -1.104 | -0.098 |
| secA2_input | 1.461 | 0.585 |
| delta_Rv3594 | 0.541 | 0.515 |
| delta_Rv3717 | -0.088 | 0.305 |
| delta_Rv3811 | 0.18 | 0.333 |
| delta_Rv0954 | 1.811 | 0.509 |
| PonA1 | 0.898 | 0.14 |
| EccD1_KO | 0.474 | -0.957 |
| EspI_KO | -0.647 | 0.399 |
| PE35_KO | -0.89 | -0.023 |
| PPE68_KO | -0.976 | -0.813 |
| glycerol2 | -0.255 | 0.0 |
| lignocerate | -0.418 | 0.198 |
| oleate | 0.135 | 0.421 |
| phosphatidylcholine | -0.105 | -0.387 |
| acetate | -0.992 | 0.514 |
| glucAc | -0.064 | 0.345 |
| Rv0950ko | 0.896 | -0.244 |
| Rv1096ko | 0.73 | 0.477 |
| Rv3684ko | 0.524 | 0.517 |
| delta_otsA_trehalose | -0.092 | 1.251 |