Top 10 genes with highest correlation to Rv3651/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3283/sseA | (cc=0.6723) | info on Rv3283/sseA |
| Rv0406c/- | (cc=0.6591) | info on Rv0406c/- |
| Rv2681/- | (cc=0.6532) | info on Rv2681/- |
| Rv0561c/- | (cc=0.6476) | info on Rv0561c/- |
| Rv2564/glnQ | (cc=0.6365) | info on Rv2564/glnQ |
| Rv0985c/mscL | (cc=0.6364) | info on Rv0985c/mscL |
| Rv2563/- | (cc=0.6359) | info on Rv2563/- |
| Rv1657/argR | (cc=0.6184) | info on Rv1657/argR |
| Rv2669/- | (cc=0.6024) | info on Rv2669/- |
| Rv3607c/folB | (cc=0.5953) | info on Rv3607c/folB |
Correlation of Rv3651/- with Rv1657/argR
Normalized LFCs for Rv3651/-:
(description and provenance of datasets)
| Rv3651/- | Rv1657/argR | |
| Fe_supp_jason_reseq | 0.923 | -1.639 |
| low_pH_jason_reseq | -0.979 | -2.076 |
| NO_jason_reseq | -2.625 | -1.801 |
| B6_jason_reseq | -0.496 | 0.006 |
| MHCII_jason_reseq | -0.503 | 0.433 |
| Isoniazid02 | -0.528 | 0.969 |
| Rifampicin4 | -1.584 | 0.479 |
| Ethambutol3 | -0.64 | 0.495 |
| Meropenem3 | 1.677 | -0.157 |
| Vancomycin16 | -0.828 | 0.0 |
| Rv2680_day32 | -0.883 | -2.613 |
| H37Rv_KO_MarP | 0.674 | 0.363 |
| hypoxia_3wks | -2.333 | -1.192 |
| hypoxia_6wks | -1.894 | -1.656 |
| glycerol | 2.73 | 1.641 |
| cholesterol | 1.434 | -0.061 |
| AJ | 0.918 | -1.037 |
| Bibs02 | 0.525 | -0.156 |
| Bibs02c | 1.682 | -1.432 |
| BL6 | -2.121 | -2.797 |
| BL6a | 0.63 | -2.043 |
| BXD01 | -1.751 | -2.399 |
| BXD010 | -2.715 | -1.531 |
| BXD011 | -2.35 | -3.232 |
| BXD03 | -1.959 | -2.075 |
| BXD04 | -2.187 | -1.329 |
| BXD05 | -2.282 | -1.63 |
| BXD06 | -2.463 | -2.42 |
| BXD07 | -2.348 | -2.322 |
| BXD08 | -1.202 | -2.3 |
| BXD09 | -2.036 | -3.271 |
| CAST | 0.297 | -0.556 |
| CCcont | -0.318 | -0.936 |
| DS01 | 2.156 | 0.441 |
| DS02 | 2.046 | -0.581 |
| DS04 | 1.941 | 0.476 |
| DS0c | 2.549 | 0.097 |
| GP01 | 0.873 | -0.916 |
| GP02 | -0.752 | -1.791 |
| GP0c | -0.255 | -1.533 |
| NOD | 1.206 | -0.69 |
| NZO | -0.172 | -2.384 |
| PWK | 0.18 | 0.21 |
| H37Rv_KO_CtpC | -0.459 | 0.128 |
| H37Rv_KO_CtpD | -0.358 | -3.369 |
| H37Rv_KO_Rv1272 | -2.989 | -1.829 |
| H37Rv_KO_SugABC | -1.491 | -0.995 |
| H37Rv_KO_MbtN | -1.493 | -1.995 |
| Trans05 | -2.769 | -3.393 |
| macrophage_unactivated | -0.35 | -1.626 |
| IL1 | -1.284 | -0.955 |
| Rapamycin | -2.047 | -1.402 |
| Tcell | -1.906 | -1.307 |
| GMCSF | -0.958 | -2.038 |
| IFNab | -1.533 | -0.357 |
| IFNg | -1.783 | -2.51 |
| IFNg_GMCSF1 | 0.0 | -2.055 |
| Rv1432_day32 | -0.632 | -3.331 |
| Rv1565c_day32 | 0.706 | -0.025 |
| secA2_input | 0.736 | 0.24 |
| delta_Rv3594 | 0.938 | -0.378 |
| delta_Rv3717 | 0.384 | -1.114 |
| delta_Rv3811 | -0.129 | -1.735 |
| delta_Rv0954 | 2.766 | 0.362 |
| PonA1 | 0.77 | -0.268 |
| EccD1_KO | 0.77 | 0.694 |
| EspI_KO | 1.243 | 1.483 |
| PE35_KO | 2.051 | 0.499 |
| PPE68_KO | 0.749 | -0.029 |
| glycerol2 | -0.588 | 0.017 |
| lignocerate | -0.605 | -0.774 |
| oleate | -0.819 | -1.198 |
| phosphatidylcholine | -0.296 | -1.566 |
| acetate | 0.326 | -0.509 |
| glucAc | -0.686 | -0.921 |
| Rv0950ko | -0.217 | -0.787 |
| Rv1096ko | 1.279 | 0.528 |
| Rv3684ko | 1.3 | -0.586 |
| delta_otsA_trehalose | 1.864 | -0.58 |